| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is argG [H]
Identifier: 110677812
GI number: 110677812
Start: 406646
End: 407866
Strand: Direct
Name: argG [H]
Synonym: RD1_0417
Alternate gene names: 110677812
Gene position: 406646-407866 (Clockwise)
Preceding gene: 110677809
Following gene: 110677814
Centisome position: 9.84
GC content: 58.07
Gene sequence:
>1221_bases ATGTCCGCGCCAAAAAAAGTTGTGCTCGCCTATTCAGGTGGTCTTGATACCTCCATCATCCTCAAGTGGCTGCAAACGGA ATACGGCTGCGAGGTCGTGACCTTCACCGCCGATCTGGGACAGGGTGAAGAGCTTGAACCCGCCCGCGCCAAGGCCGAGA TGATGGGCGCCTCCGACATCTATATCGAAGACGTGCGCGAAGAATTCGTGCGCGATTTCGTCTTTCCGATGTTCCGCGCC AATGCGGTTTACGAGGGGCTGTACCTGCTGGGCACGTCGATCGCGCGCCCGCTTATTTCCAAACGTCTTGTTGAAATCGC CGAAGAGACCGGCGCGGATGCCATCGCCCATGGCGCAACCGGCAAGGGCAACGATCAGGTGCGGTTCGAACTGGCTGCAT ATGCGCTGAACCCGGACATCAAGGTCATCGCCCCCTGGCGCGAATGGGATCTGTCCAGCCGTACCAAACTGATTGACTTT GCAGAGAAAAATCAAATTCCAATTGCCAAGGACAAGCGTGGCGAGGCACCGTTTTCCGTCGATGCCAACCTGTTGCACAC CTCCTCCGAAGGCAAGGTTCTCGAAAACCCGGCTGTGGATGCGCCAGACTATGTCTATCAGCGGACCGTCAACCCCGAGG ACGCGCCTGACACGCCCGAGTATATCGAGATCGGTTTCGAGAAAGGCGACGCGGTCAGCATCAATGGTGAGGCGATGTCC CCCGCCACGATCCTGACCAAGCTGAATGAGATCGGCGGCAAACACGGCTGCGGGCGTCTCGACCTTGTTGAGGGGCGTTT TGTCGGGATGAAATCGCGCGGTATCTACGAAACACCCGGCGGCACGCTTTTGCTGGAGGCGCATCGCGGTATCGAATCGA TCACGCTGGATCGCGGGGCCATGCATCTCAAGGATGAGTTGATGCCGCGCTATGCTGAGCTGATCTACAACGGTTTCTGG TTCAGCCCCGAACGCACCATGTTGCAAGCCGCGATTGACGCGAGCCAAACCCATGTGACCGGCACCGTGCGTCTCAAGCT GTACAAGGGTCTTGCGCGCACCGTTGGCCGCTGGTCTGATCATTCGCTCTATTCCGAGGCCCATGTGACCTTTGAAGAGG ATGCGGGGGCCTATGATCAAACGGATGCCGCAGGCTTTATCCAGTTGAATGCCCTGCGTTTGAAGCTGCTTGCTGCGCGG GATCGTCGCCTCAAGAGCTAA
Upstream 100 bases:
>100_bases TCGATACGCCGCGCCCCCGCTCAGGTCAACGCAGGCTTCATTCTTGCCCGCGCCTTCAAAACCCGGTAGGCCGCGTGGCA AATCGAAAAGGAAGATCTTC
Downstream 100 bases:
>100_bases GGCATCATGCGAAAAACGTGGATCACGTAACGCTGCCTGAAATCAAGGATTTCAACGCATTACGTGATACTCATTGTTTC AGTCGTTTCGTCAGACGCCA
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKAEMMGASDIYIEDVREEFVRDFVFPMFRA NAVYEGLYLLGTSIARPLISKRLVEIAEETGADAIAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDF AEKNQIPIAKDKRGEAPFSVDANLLHTSSEGKVLENPAVDAPDYVYQRTVNPEDAPDTPEYIEIGFEKGDAVSINGEAMS PATILTKLNEIGGKHGCGRLDLVEGRFVGMKSRGIYETPGGTLLLEAHRGIESITLDRGAMHLKDELMPRYAELIYNGFW FSPERTMLQAAIDASQTHVTGTVRLKLYKGLARTVGRWSDHSLYSEAHVTFEEDAGAYDQTDAAGFIQLNALRLKLLAAR DRRLKS
Sequences:
>Translated_406_residues MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKAEMMGASDIYIEDVREEFVRDFVFPMFRA NAVYEGLYLLGTSIARPLISKRLVEIAEETGADAIAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDF AEKNQIPIAKDKRGEAPFSVDANLLHTSSEGKVLENPAVDAPDYVYQRTVNPEDAPDTPEYIEIGFEKGDAVSINGEAMS PATILTKLNEIGGKHGCGRLDLVEGRFVGMKSRGIYETPGGTLLLEAHRGIESITLDRGAMHLKDELMPRYAELIYNGFW FSPERTMLQAAIDASQTHVTGTVRLKLYKGLARTVGRWSDHSLYSEAHVTFEEDAGAYDQTDAAGFIQLNALRLKLLAAR DRRLKS >Mature_405_residues SAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKAEMMGASDIYIEDVREEFVRDFVFPMFRAN AVYEGLYLLGTSIARPLISKRLVEIAEETGADAIAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDFA EKNQIPIAKDKRGEAPFSVDANLLHTSSEGKVLENPAVDAPDYVYQRTVNPEDAPDTPEYIEIGFEKGDAVSINGEAMSP ATILTKLNEIGGKHGCGRLDLVEGRFVGMKSRGIYETPGGTLLLEAHRGIESITLDRGAMHLKDELMPRYAELIYNGFWF SPERTMLQAAIDASQTHVTGTVRLKLYKGLARTVGRWSDHSLYSEAHVTFEEDAGAYDQTDAAGFIQLNALRLKLLAARD RRLKS
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI53759107, Length=404, Percent_Identity=48.5148514851485, Blast_Score=370, Evalue=1e-103, Organism=Homo sapiens, GI16950633, Length=404, Percent_Identity=48.5148514851485, Blast_Score=370, Evalue=1e-103, Organism=Escherichia coli, GI1789563, Length=425, Percent_Identity=28.9411764705882, Blast_Score=133, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6324514, Length=405, Percent_Identity=42.2222222222222, Blast_Score=323, Evalue=2e-89, Organism=Drosophila melanogaster, GI21358151, Length=407, Percent_Identity=45.2088452088452, Blast_Score=340, Evalue=1e-93,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 [H]
Pfam domain/function: PF00764 Arginosuc_synth [H]
EC number: =6.3.4.5 [H]
Molecular weight: Translated: 44852; Mature: 44721
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1 ; PS00565 ARGININOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKAEMMGASDI CCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCH YIEDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEETGADAIAHGAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC GKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDFAEKNQIPIAKDKRGEAPFSV CCCCCEEEEEEEEEEECCCEEEEECCHHCCCCCCCEEEEHHCCCCCCCCCCCCCCCCCEE DANLLHTSSEGKVLENPAVDAPDYVYQRTVNPEDAPDTPEYIEIGFEKGDAVSINGEAMS CCEEEEECCCCCEECCCCCCCCCHHHEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCC PATILTKLNEIGGKHGCGRLDLVEGRFVGMKSRGIYETPGGTLLLEAHRGIESITLDRGA HHHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCCEECCCCEEEEEECCCCCEEEECCCC MHLKDELMPRYAELIYNGFWFSPERTMLQAAIDASQTHVTGTVRLKLYKGLARTVGRWSD HHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHCCCCC HSLYSEAHVTFEEDAGAYDQTDAAGFIQLNALRLKLLAARDRRLKS CCCHHCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure SAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKAEMMGASDI CCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCH YIEDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEETGADAIAHGAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC GKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDFAEKNQIPIAKDKRGEAPFSV CCCCCEEEEEEEEEEECCCEEEEECCHHCCCCCCCEEEEHHCCCCCCCCCCCCCCCCCEE DANLLHTSSEGKVLENPAVDAPDYVYQRTVNPEDAPDTPEYIEIGFEKGDAVSINGEAMS CCEEEEECCCCCEECCCCCCCCCHHHEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCC PATILTKLNEIGGKHGCGRLDLVEGRFVGMKSRGIYETPGGTLLLEAHRGIESITLDRGA HHHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCCEECCCCEEEEEECCCCCEEEECCCC MHLKDELMPRYAELIYNGFWFSPERTMLQAAIDASQTHVTGTVRLKLYKGLARTVGRWSD HHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHCCCCC HSLYSEAHVTFEEDAGAYDQTDAAGFIQLNALRLKLLAARDRRLKS CCCHHCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA