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The map label for this gene is oruR [H]

Identifier: 110677655

GI number: 110677655

Start: 249157

End: 250302

Strand: Direct

Name: oruR [H]

Synonym: RD1_0249

Alternate gene names: 110677655

Gene position: 249157-250302 (Clockwise)

Preceding gene: 110677654

Following gene: 110677656

Centisome position: 6.03

GC content: 57.42

Gene sequence:

>1146_bases
TTGCGCAGTCTGACGCTGCCGCCATCGCAAGGTGGGGCAGGACGTTTCGACAGCGCGTGCTGCACTTGGCTTAAGGTGTT
TGTCGCACTAACATTTGATGATAGCGACTGCCTTGAGATGACCATTGATAAACTGCCGCACCTATCGACCGTTTCCAGCC
AGTTCATTGCGGACTGGCTGGCGGCGTTGCGGCCTCTGTGCAGTGCGGATCACTTTACTGACCTGTTGCAGCGCTCCGAT
CTGCAATCCGGCGAGGACGTTCAAAATGGCCGGGTGACGCTTGATCAGATTGTCTGTCTTTATCAACTGGCGGCTGTCGA
GACAGGGGATGAAATGATGGGCCTCTGGTCGCGTCCGATCCGGCATCGCGCCTTGCAGCACCTTTTGACATCTGTTCGCG
AAGCGACCTCTTTGTCCTCTGCGCTCTACCGGTTCTCGACGTTCTGGAACCTCTTGCTGGATGACTATGAATTTACGTTC
TCTGAGGATGAAACCGGATCTGTCCTCAGGCTCACGCCGCGCGGCGATCACGAACCCCAACGGTTCGGCCATATGCTGAT
CCTGAAACTGGCGCATGGTCTGATTTCATGGCTGGCGCGCGATGAGGTGCCCGTCACGGCGGTGGATTTCGCATTTGCGC
GCCCCCGCTTTGACGAAGACTATGCCGTTATCTTTCCCGCGCCCGTCCGCTTCGACCAGTCTGCAACGGCGATTACATTC
GATCTGAGCCTTCAGGGCCCGGTTCAACTACGCAGCACGGCCGATTTGGATGTCTTCTTGCAGAATGCGCCCAGAGACTG
GATTTTTACGCGCTCTGAAGTGCACACCCAATCCTTGCGGGTGCGCAGCTATCTCAGCCAAGCAGGCTGGGACACTGCAA
ACCTGACGGGGGCTGCGCGCGCACTGCATCTGACACCGCGCACGCTGATCCGCAAGCTGGAAGCGGATGGCACTTCGTTT
CAGATGATCAAGGACGCCTTGCGCCGTGACATTGCGATCCGTCACTTGCAAACGGGTCAGCACAGCATTGAAGCCATCGC
TCATGAGGTCGGTTTTTCCTCGGCGGCAAACTTCCACAAAGCGTTTCAGCGATGGACGGGCAACACGCCCAGCTCCTACA
GACGACGGAATGCGGGAAAGAGGTAA

Upstream 100 bases:

>100_bases
ATATCAACGGCGCGCAATCGACGCAAACAGTGGAACGATGCAGGCTGGCCGAGCCGTCATCCGGCGGACCATTGGGATCG
CCTGACACAGCCGCCCGCCG

Downstream 100 bases:

>100_bases
TATTGTCACTTTCAGACAATAAGCTGTCACCTCACGAGATAGCGCCAAAGAAGCCAGATGGCTAGTAAACCCAAGTAATA
GATGTTTCACACCAACCGGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRSLTLPPSQGGAGRFDSACCTWLKVFVALTFDDSDCLEMTIDKLPHLSTVSSQFIADWLAALRPLCSADHFTDLLQRSD
LQSGEDVQNGRVTLDQIVCLYQLAAVETGDEMMGLWSRPIRHRALQHLLTSVREATSLSSALYRFSTFWNLLLDDYEFTF
SEDETGSVLRLTPRGDHEPQRFGHMLILKLAHGLISWLARDEVPVTAVDFAFARPRFDEDYAVIFPAPVRFDQSATAITF
DLSLQGPVQLRSTADLDVFLQNAPRDWIFTRSEVHTQSLRVRSYLSQAGWDTANLTGAARALHLTPRTLIRKLEADGTSF
QMIKDALRRDIAIRHLQTGQHSIEAIAHEVGFSSAANFHKAFQRWTGNTPSSYRRRNAGKR

Sequences:

>Translated_381_residues
MRSLTLPPSQGGAGRFDSACCTWLKVFVALTFDDSDCLEMTIDKLPHLSTVSSQFIADWLAALRPLCSADHFTDLLQRSD
LQSGEDVQNGRVTLDQIVCLYQLAAVETGDEMMGLWSRPIRHRALQHLLTSVREATSLSSALYRFSTFWNLLLDDYEFTF
SEDETGSVLRLTPRGDHEPQRFGHMLILKLAHGLISWLARDEVPVTAVDFAFARPRFDEDYAVIFPAPVRFDQSATAITF
DLSLQGPVQLRSTADLDVFLQNAPRDWIFTRSEVHTQSLRVRSYLSQAGWDTANLTGAARALHLTPRTLIRKLEADGTSF
QMIKDALRRDIAIRHLQTGQHSIEAIAHEVGFSSAANFHKAFQRWTGNTPSSYRRRNAGKR
>Mature_381_residues
MRSLTLPPSQGGAGRFDSACCTWLKVFVALTFDDSDCLEMTIDKLPHLSTVSSQFIADWLAALRPLCSADHFTDLLQRSD
LQSGEDVQNGRVTLDQIVCLYQLAAVETGDEMMGLWSRPIRHRALQHLLTSVREATSLSSALYRFSTFWNLLLDDYEFTF
SEDETGSVLRLTPRGDHEPQRFGHMLILKLAHGLISWLARDEVPVTAVDFAFARPRFDEDYAVIFPAPVRFDQSATAITF
DLSLQGPVQLRSTADLDVFLQNAPRDWIFTRSEVHTQSLRVRSYLSQAGWDTANLTGAARALHLTPRTLIRKLEADGTSF
QMIKDALRRDIAIRHLQTGQHSIEAIAHEVGFSSAANFHKAFQRWTGNTPSSYRRRNAGKR

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 42944; Mature: 42944

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLTLPPSQGGAGRFDSACCTWLKVFVALTFDDSDCLEMTIDKLPHLSTVSSQFIADWL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCHHHHHHHHHHHHH
AALRPLCSADHFTDLLQRSDLQSGEDVQNGRVTLDQIVCLYQLAAVETGDEMMGLWSRPI
HHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHH
RHRALQHLLTSVREATSLSSALYRFSTFWNLLLDDYEFTFSEDETGSVLRLTPRGDHEPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCCCCHH
RFGHMLILKLAHGLISWLARDEVPVTAVDFAFARPRFDEDYAVIFPAPVRFDQSATAITF
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEE
DLSLQGPVQLRSTADLDVFLQNAPRDWIFTRSEVHTQSLRVRSYLSQAGWDTANLTGAAR
EEEECCCEEECCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ALHLTPRTLIRKLEADGTSFQMIKDALRRDIAIRHLQTGQHSIEAIAHEVGFSSAANFHK
EEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH
AFQRWTGNTPSSYRRRNAGKR
HHHHHCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MRSLTLPPSQGGAGRFDSACCTWLKVFVALTFDDSDCLEMTIDKLPHLSTVSSQFIADWL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCHHHHHHHHHHHHH
AALRPLCSADHFTDLLQRSDLQSGEDVQNGRVTLDQIVCLYQLAAVETGDEMMGLWSRPI
HHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHH
RHRALQHLLTSVREATSLSSALYRFSTFWNLLLDDYEFTFSEDETGSVLRLTPRGDHEPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCCCCHH
RFGHMLILKLAHGLISWLARDEVPVTAVDFAFARPRFDEDYAVIFPAPVRFDQSATAITF
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEE
DLSLQGPVQLRSTADLDVFLQNAPRDWIFTRSEVHTQSLRVRSYLSQAGWDTANLTGAAR
EEEECCCEEECCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ALHLTPRTLIRKLEADGTSFQMIKDALRRDIAIRHLQTGQHSIEAIAHEVGFSSAANFHK
EEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH
AFQRWTGNTPSSYRRRNAGKR
HHHHHCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]