| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is argH [H]
Identifier: 110634963
GI number: 110634963
Start: 2836770
End: 2838269
Strand: Reverse
Name: argH [H]
Synonym: Meso_2629
Alternate gene names: 110634963
Gene position: 2838269-2836770 (Counterclockwise)
Preceding gene: 110634964
Following gene: 110634962
Centisome position: 64.32
GC content: 59.6
Gene sequence:
>1500_bases ATGACTGAGAATACAGCCACCCTCATACGCACCGCTAACGGCCGGCTGACCGAGCCCATGGTCGGCGGATTGGACCGGTA TGATTCACGGACGGTCGAGACCAAGCTGGAGGCGGTTCACGCATTCGACAAGGCCCATCTCGTCATGCTGGTCGAGCAAG GGCTTGTGGGGCGGCAGGACGGCGCACTTATGCTGAGCGCGCTCCGTCATATGGAAAAGGAAGGTGCCGTCGCCACCAGG ATGCGCGTGGGTGGGGCGCTGCATTCGGGCGAATATTACCTGACTGAGCGGCTGGGCCCCAAACTGGGTGGCACTATCCA TCTTGGCAGGAGTTCGGCCGATCTTGCCGGTGTGAGCAGGAGAATAGTTCTCAGAACGGCTGTACTTTCCATGGCAAGGC AACTGATTGACGTGCAGTTGACCATTCTCAATACAGCGCCCGACCATCTCGATTGCATCATACCTGCTTACACCCATGGA CAGCCCGCGCAGCCCACCACCTATGCACATTGGCTGATGATGTGGGCAAACGTGTTTCACCGGGATACGCAGCGGCTGCT GGGCGGTCTCGACCGGCTTAACTTGTCGCCTGCCGGCGCCGCTGTGGCGACCGGCACTGACTTTGCCATCGATCGGAGCC GTGTCGCGACATTGCTCGGATTTGACGGCATCCTCGTCAATACGATGGATGCCACATTGAGCAACGACGTGTTTGCCGAA TATGTGTCGATCTTTTCCTTGCTCTGCGCGAATATGGGCCGCTTGGCGGAGGATTTGCTGTTCTGGTCCACCCAGGAAGC AGGCATAGCCGTTATTCCAGACCGCTTCTGCGACACCAGTTCGATCATGTCACAGAAGAGGAATCCGAGCTTTCTGCATG AATTGCGCGCCATGGGCGCTGAAGCGGCCTCCACTTTGCTGTTGGTAAGCGGAACAGAGTTCGGAACCACCGGGCAGTCA GTGCACGCGCGAAAGACGGCAGAAAACGCCGTCTGGGCACTCGTCGGCAAAATCATCAAGCGCTTGCCACAGATGGCCGA TCTCATCGCCAGCACCGAAATCGATCCACAACGCGCCATGCGCCTTACGGAAAACAGCTGGAGCCAGGCGACCGATGTCG CGAGTGCCTTGGTGCGGCATCTCGGGCTGAACTGGCGTGAAGCCCACCATGTCGTTTCGATCCTCGTTCGACTTGCGACC GAGCGGCGCCTGCCGCCCGACCAAGTGGATCTCGCTTTGTTGCGAACAGCGCTGGCAGAAGCGCAAATTGCCGCCGAGGA CCTCGACGGCTTTGACATTGCCGATGCTGTCGATGTGCGCGCCTTTGTGGAGCGCAGGACGAACGAAGGAAGTCCTGCTC CCTCCGCCGTGACGAGCAGCGCCGCCTGTCTCCTGGGCATCACGACTGCGCAGCAGGCAAAGGTGGAAGCTGCGGAGCGC ACCGTTGCCGAGGCGTCGAAAGCGCTCGAAAGCGCCATCGATTCGATCGTGAATGACTAA
Upstream 100 bases:
>100_bases GCTTCCCGAGCAGGTGCGGACGTCGCTGATAAGGCATTTGCGGGGCAGGTGACCCCATGGCGTGCCGTTACCCATTCCAA CTCGCCCCACAGGTAGGATC
Downstream 100 bases:
>100_bases ATGGATATAAAGAAGGGGAAAGGTTGAGCGAACTTCCCCCGGAGAAGTGGCCATCATCAATCCCTGATGTGGAGAGGGGG CCAGCTTGGATGTCGCTCAG
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MTENTATLIRTANGRLTEPMVGGLDRYDSRTVETKLEAVHAFDKAHLVMLVEQGLVGRQDGALMLSALRHMEKEGAVATR MRVGGALHSGEYYLTERLGPKLGGTIHLGRSSADLAGVSRRIVLRTAVLSMARQLIDVQLTILNTAPDHLDCIIPAYTHG QPAQPTTYAHWLMMWANVFHRDTQRLLGGLDRLNLSPAGAAVATGTDFAIDRSRVATLLGFDGILVNTMDATLSNDVFAE YVSIFSLLCANMGRLAEDLLFWSTQEAGIAVIPDRFCDTSSIMSQKRNPSFLHELRAMGAEAASTLLLVSGTEFGTTGQS VHARKTAENAVWALVGKIIKRLPQMADLIASTEIDPQRAMRLTENSWSQATDVASALVRHLGLNWREAHHVVSILVRLAT ERRLPPDQVDLALLRTALAEAQIAAEDLDGFDIADAVDVRAFVERRTNEGSPAPSAVTSSAACLLGITTAQQAKVEAAER TVAEASKALESAIDSIVND
Sequences:
>Translated_499_residues MTENTATLIRTANGRLTEPMVGGLDRYDSRTVETKLEAVHAFDKAHLVMLVEQGLVGRQDGALMLSALRHMEKEGAVATR MRVGGALHSGEYYLTERLGPKLGGTIHLGRSSADLAGVSRRIVLRTAVLSMARQLIDVQLTILNTAPDHLDCIIPAYTHG QPAQPTTYAHWLMMWANVFHRDTQRLLGGLDRLNLSPAGAAVATGTDFAIDRSRVATLLGFDGILVNTMDATLSNDVFAE YVSIFSLLCANMGRLAEDLLFWSTQEAGIAVIPDRFCDTSSIMSQKRNPSFLHELRAMGAEAASTLLLVSGTEFGTTGQS VHARKTAENAVWALVGKIIKRLPQMADLIASTEIDPQRAMRLTENSWSQATDVASALVRHLGLNWREAHHVVSILVRLAT ERRLPPDQVDLALLRTALAEAQIAAEDLDGFDIADAVDVRAFVERRTNEGSPAPSAVTSSAACLLGITTAQQAKVEAAER TVAEASKALESAIDSIVND >Mature_498_residues TENTATLIRTANGRLTEPMVGGLDRYDSRTVETKLEAVHAFDKAHLVMLVEQGLVGRQDGALMLSALRHMEKEGAVATRM RVGGALHSGEYYLTERLGPKLGGTIHLGRSSADLAGVSRRIVLRTAVLSMARQLIDVQLTILNTAPDHLDCIIPAYTHGQ PAQPTTYAHWLMMWANVFHRDTQRLLGGLDRLNLSPAGAAVATGTDFAIDRSRVATLLGFDGILVNTMDATLSNDVFAEY VSIFSLLCANMGRLAEDLLFWSTQEAGIAVIPDRFCDTSSIMSQKRNPSFLHELRAMGAEAASTLLLVSGTEFGTTGQSV HARKTAENAVWALVGKIIKRLPQMADLIASTEIDPQRAMRLTENSWSQATDVASALVRHLGLNWREAHHVVSILVRLATE RRLPPDQVDLALLRTALAEAQIAAEDLDGFDIADAVDVRAFVERRTNEGSPAPSAVTSSAACLLGITTAQQAKVEAAERT VAEASKALESAIDSIVND
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=398, Percent_Identity=28.1407035175879, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI68303542, Length=398, Percent_Identity=28.1407035175879, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI68303547, Length=394, Percent_Identity=28.1725888324873, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI68303549, Length=398, Percent_Identity=26.1306532663317, Blast_Score=105, Evalue=1e-22, Organism=Escherichia coli, GI1790398, Length=448, Percent_Identity=27.6785714285714, Blast_Score=153, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6321806, Length=441, Percent_Identity=28.3446712018141, Blast_Score=135, Evalue=1e-32, Organism=Drosophila melanogaster, GI221473854, Length=465, Percent_Identity=28.6021505376344, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI78706858, Length=465, Percent_Identity=28.6021505376344, Blast_Score=145, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 53949; Mature: 53818
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENTATLIRTANGRLTEPMVGGLDRYDSRTVETKLEAVHAFDKAHLVMLVEQGLVGRQD CCCCCEEEEEECCCCCCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GALMLSALRHMEKEGAVATRMRVGGALHSGEYYLTERLGPKLGGTIHLGRSSADLAGVSR HHHHHHHHHHHHHCCCHHHHHHHCCEEECCCEEEHHHCCCCCCCEEEECCCCHHHHHHHH RIVLRTAVLSMARQLIDVQLTILNTAPDHLDCIIPAYTHGQPAQPTTYAHWLMMWANVFH HHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH RDTQRLLGGLDRLNLSPAGAAVATGTDFAIDRSRVATLLGFDGILVNTMDATLSNDVFAE HHHHHHHCCHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH YVSIFSLLCANMGRLAEDLLFWSTQEAGIAVIPDRFCDTSSIMSQKRNPSFLHELRAMGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHCCCHHHHHHCCCCHHHHHHHHHHCH EAASTLLLVSGTEFGTTGQSVHARKTAENAVWALVGKIIKRLPQMADLIASTEIDPQRAM HHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RLTENSWSQATDVASALVRHLGLNWREAHHVVSILVRLATERRLPPDQVDLALLRTALAE HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AQIAAEDLDGFDIADAVDVRAFVERRTNEGSPAPSAVTSSAACLLGITTAQQAKVEAAER HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHEEEECHHHHHHHHHHHH TVAEASKALESAIDSIVND HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TENTATLIRTANGRLTEPMVGGLDRYDSRTVETKLEAVHAFDKAHLVMLVEQGLVGRQD CCCCEEEEEECCCCCCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GALMLSALRHMEKEGAVATRMRVGGALHSGEYYLTERLGPKLGGTIHLGRSSADLAGVSR HHHHHHHHHHHHHCCCHHHHHHHCCEEECCCEEEHHHCCCCCCCEEEECCCCHHHHHHHH RIVLRTAVLSMARQLIDVQLTILNTAPDHLDCIIPAYTHGQPAQPTTYAHWLMMWANVFH HHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH RDTQRLLGGLDRLNLSPAGAAVATGTDFAIDRSRVATLLGFDGILVNTMDATLSNDVFAE HHHHHHHCCHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH YVSIFSLLCANMGRLAEDLLFWSTQEAGIAVIPDRFCDTSSIMSQKRNPSFLHELRAMGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHCCCHHHHHHCCCCHHHHHHHHHHCH EAASTLLLVSGTEFGTTGQSVHARKTAENAVWALVGKIIKRLPQMADLIASTEIDPQRAM HHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RLTENSWSQATDVASALVRHLGLNWREAHHVVSILVRLATERRLPPDQVDLALLRTALAE HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AQIAAEDLDGFDIADAVDVRAFVERRTNEGSPAPSAVTSSAACLLGITTAQQAKVEAAER HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHEEEECHHHHHHHHHHHH TVAEASKALESAIDSIVND HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA