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The map label for this gene is lysR [C]

Identifier: 110634964

GI number: 110634964

Start: 2838318

End: 2839478

Strand: Reverse

Name: lysR [C]

Synonym: Meso_2630

Alternate gene names: 110634964

Gene position: 2839478-2838318 (Counterclockwise)

Preceding gene: 110634965

Following gene: 110634963

Centisome position: 64.35

GC content: 61.15

Gene sequence:

>1161_bases
ATGGACCTACCCACACTCACTATGGTGCACGCCGTCTTCGAAACAGGGTCCATACGCCATGCCGGTCGGCTGATAGACAA
GTCGCCATCCACGGTCAGCGGCGCGCTTGTGCGGTTTGAGAACGCTGTCGGCATACCCATGGTGCGCCGAGAAGGCCGGG
CTCTTTCCCTCACGTTGGAGGCGGAGCGCCGGGCGCCGGCCTTGGCGCTGATCGATGCCGAGGTGCGCCGGCTGTGCAGT
CTGGCCTCGCAAGATGGGGTCATCCCGCCGATCGGTATCGAGGCCCTACGCCGGATAACCATCGTGGCGCACCGCGGCAG
CATCCGAAAGGCGGCCAAGGTCATCGCAATGGGGCAGCCCCAGCTCACGCGGCAAATCGGTGATGTCGAGCGCCATCTGG
GGCTCGAGATATTCAAGCGAAGCCGGCATGGCGTGGTGTGCACCGAAAATGGAGCCATTGTATTGGCTATCGCCGGTCGA
ATTCTTGATGCTTGGGACAGGCTTTCATTCGCTGCCGCCGAGCATTTTCGGCGGGCCGTATCCACGTGGAGCCTGGGCAC
CATCATGCCACTCGGCCACGAGAGCTTCGTGGCGGAAATGCTCGCGCGGCTCTCGGCGCGATGGGCGGACGAACGGCCGC
GTCAGCCTCTTTCGATAATCGGCCTTACCGCTGATGAGCTGATGCTCGGCCTCAAATCGCGCCGCTTCGACGCGGTGCTG
CTCGATCATCTCAATATTCCGCTGGAATATGAGAAAGAGGTTCTTTCCGAATCCAGGCTTTGCGTCGTCGGCAGCAATGC
GGCTGCGCCGCCGCTGCCGGATTTCAAAGCCCTGTTCCGCAGCCGGAAAATAGCTTTGCTCAGCAAGAAGAGCGGCCTCA
GGCAGGTCTGCGACAGGTTCATGTCGGACGTCGTCAGCAAGGACGAGTTCTACAGCCTCGACATCCTCGAGTCCGATTCC
ATACCGGTGATCGTCCGGCTGGTTTCGGACTACGGCTATATCACGGTGCTGCAAAGGTCGGTTGTCGGCCATCTGCCGTA
TGATTTGTGGCAAATGCCGATACCGGACGAATACACCCAGGCTCTGCTCCTGGCGTGGCGAAAAAACGCGCTTCCCGAGC
AGGTGCGGACGTCGCTGATAAGGCATTTGCGGGGCAGGTGA

Upstream 100 bases:

>100_bases
TCCGCTCTCCCCGGACCGCAGCATTCCCTATTCCTGGCCGGAACGTGGAGAATACTGGCCACCGGTCAGGGAATAACTGG
CAGCTCGGACACGCCGCAAG

Downstream 100 bases:

>100_bases
CCCCATGGCGTGCCGTTACCCATTCCAACTCGCCCCACAGGTAGGATCATGACTGAGAATACAGCCACCCTCATACGCAC
CGCTAACGGCCGGCTGACCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: LysR Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LysR Family

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MDLPTLTMVHAVFETGSIRHAGRLIDKSPSTVSGALVRFENAVGIPMVRREGRALSLTLEAERRAPALALIDAEVRRLCS
LASQDGVIPPIGIEALRRITIVAHRGSIRKAAKVIAMGQPQLTRQIGDVERHLGLEIFKRSRHGVVCTENGAIVLAIAGR
ILDAWDRLSFAAAEHFRRAVSTWSLGTIMPLGHESFVAEMLARLSARWADERPRQPLSIIGLTADELMLGLKSRRFDAVL
LDHLNIPLEYEKEVLSESRLCVVGSNAAAPPLPDFKALFRSRKIALLSKKSGLRQVCDRFMSDVVSKDEFYSLDILESDS
IPVIVRLVSDYGYITVLQRSVVGHLPYDLWQMPIPDEYTQALLLAWRKNALPEQVRTSLIRHLRGR

Sequences:

>Translated_386_residues
MDLPTLTMVHAVFETGSIRHAGRLIDKSPSTVSGALVRFENAVGIPMVRREGRALSLTLEAERRAPALALIDAEVRRLCS
LASQDGVIPPIGIEALRRITIVAHRGSIRKAAKVIAMGQPQLTRQIGDVERHLGLEIFKRSRHGVVCTENGAIVLAIAGR
ILDAWDRLSFAAAEHFRRAVSTWSLGTIMPLGHESFVAEMLARLSARWADERPRQPLSIIGLTADELMLGLKSRRFDAVL
LDHLNIPLEYEKEVLSESRLCVVGSNAAAPPLPDFKALFRSRKIALLSKKSGLRQVCDRFMSDVVSKDEFYSLDILESDS
IPVIVRLVSDYGYITVLQRSVVGHLPYDLWQMPIPDEYTQALLLAWRKNALPEQVRTSLIRHLRGR
>Mature_386_residues
MDLPTLTMVHAVFETGSIRHAGRLIDKSPSTVSGALVRFENAVGIPMVRREGRALSLTLEAERRAPALALIDAEVRRLCS
LASQDGVIPPIGIEALRRITIVAHRGSIRKAAKVIAMGQPQLTRQIGDVERHLGLEIFKRSRHGVVCTENGAIVLAIAGR
ILDAWDRLSFAAAEHFRRAVSTWSLGTIMPLGHESFVAEMLARLSARWADERPRQPLSIIGLTADELMLGLKSRRFDAVL
LDHLNIPLEYEKEVLSESRLCVVGSNAAAPPLPDFKALFRSRKIALLSKKSGLRQVCDRFMSDVVSKDEFYSLDILESDS
IPVIVRLVSDYGYITVLQRSVVGHLPYDLWQMPIPDEYTQALLLAWRKNALPEQVRTSLIRHLRGR

Specific function: This Protein Activates The Transcription Of The Lysa Gene Encoding Diaminopimelate Decarboxylase. Lysr Is Also A Negative Regulator Of Its Own Expression. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42995; Mature: 42995

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLPTLTMVHAVFETGSIRHAGRLIDKSPSTVSGALVRFENAVGIPMVRREGRALSLTLE
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEECCCCEEEEEEE
AERRAPALALIDAEVRRLCSLASQDGVIPPIGIEALRRITIVAHRGSIRKAAKVIAMGQP
CCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHCCCH
QLTRQIGDVERHLGLEIFKRSRHGVVCTENGAIVLAIAGRILDAWDRLSFAAAEHFRRAV
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
STWSLGTIMPLGHESFVAEMLARLSARWADERPRQPLSIIGLTADELMLGLKSRRFDAVL
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHHH
LDHLNIPLEYEKEVLSESRLCVVGSNAAAPPLPDFKALFRSRKIALLSKKSGLRQVCDRF
HHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCHHEEHHHHCCHHHHHHHH
MSDVVSKDEFYSLDILESDSIPVIVRLVSDYGYITVLQRSVVGHLPYDLWQMPIPDEYTQ
HHHHHCCCCEEEEEEECCCCCCEEEEEHHCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHH
ALLLAWRKNALPEQVRTSLIRHLRGR
HHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLPTLTMVHAVFETGSIRHAGRLIDKSPSTVSGALVRFENAVGIPMVRREGRALSLTLE
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEECCCCEEEEEEE
AERRAPALALIDAEVRRLCSLASQDGVIPPIGIEALRRITIVAHRGSIRKAAKVIAMGQP
CCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHCCCH
QLTRQIGDVERHLGLEIFKRSRHGVVCTENGAIVLAIAGRILDAWDRLSFAAAEHFRRAV
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
STWSLGTIMPLGHESFVAEMLARLSARWADERPRQPLSIIGLTADELMLGLKSRRFDAVL
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHHH
LDHLNIPLEYEKEVLSESRLCVVGSNAAAPPLPDFKALFRSRKIALLSKKSGLRQVCDRF
HHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCHHEEHHHHCCHHHHHHHH
MSDVVSKDEFYSLDILESDSIPVIVRLVSDYGYITVLQRSVVGHLPYDLWQMPIPDEYTQ
HHHHHCCCCEEEEEEECCCCCCEEEEEHHCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHH
ALLLAWRKNALPEQVRTSLIRHLRGR
HHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA