| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634827
Identifier: 110634827
GI number: 110634827
Start: 2664760
End: 2665167
Strand: Reverse
Name: 110634827
Synonym: Meso_2486
Alternate gene names: NA
Gene position: 2665167-2664760 (Counterclockwise)
Preceding gene: 110634829
Following gene: 110634826
Centisome position: 60.4
GC content: 54.9
Gene sequence:
>408_bases ATGAGAACCATTATATTGGCCACGGTCATGATGCTGGCCATTCCGGCATCTGCCTTTGCCCAAGATAATTGCAGTGCTGC CGAGGATCAGGCCACCATGAACGAATGTGCCGATGCCGCGTTCAGGGAAGCCGACAAGAAACTCAATGAGCTTTATAAAC AGATCGAAGCCCGTCTCTCAGACGATGCGGAAACGAAGAATCTGCTTGTGCAAGCCCAGCGCGATTGGGTCAAGTTCCGC GACGCGGAGTGCAGTTTCCAGACAGCGTCTGCTGCCGGGGGAAGCGTTATGCCAATGCTCACCGCCACATGCATGGAAAG CCTCACGCAAGTGCGTGTCGAAGCCTTCGAGGGTTATCTGAATTGCGAAGAAGGCGATCTGAGCTGTCCGGTTCCGACCG CGAACTGA
Upstream 100 bases:
>100_bases TAGTCCTCGTCTGAAACGAGATTACGCGGCCTGATGCCAGGGCAGTCCGTCGCCCTTTGATGGCAACGGCGCGCCAGGCA TTTTCATGGAGGGACAGTCA
Downstream 100 bases:
>100_bases TCCGTCATCAAGATTGAGGTGCTCTTCCCGCTCATCGTGTCGACTTCGGCACTTTTTTCAAACGGAAAAGTTATCGCGCC GGATGGGAATGCGTCCTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRTIILATVMMLAIPASAFAQDNCSAAEDQATMNECADAAFREADKKLNELYKQIEARLSDDAETKNLLVQAQRDWVKFR DAECSFQTASAAGGSVMPMLTATCMESLTQVRVEAFEGYLNCEEGDLSCPVPTAN
Sequences:
>Translated_135_residues MRTIILATVMMLAIPASAFAQDNCSAAEDQATMNECADAAFREADKKLNELYKQIEARLSDDAETKNLLVQAQRDWVKFR DAECSFQTASAAGGSVMPMLTATCMESLTQVRVEAFEGYLNCEEGDLSCPVPTAN >Mature_135_residues MRTIILATVMMLAIPASAFAQDNCSAAEDQATMNECADAAFREADKKLNELYKQIEARLSDDAETKNLLVQAQRDWVKFR DAECSFQTASAAGGSVMPMLTATCMESLTQVRVEAFEGYLNCEEGDLSCPVPTAN
Specific function: Unknown
COG id: COG3755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14727; Mature: 14727
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIILATVMMLAIPASAFAQDNCSAAEDQATMNECADAAFREADKKLNELYKQIEARLS CHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DDAETKNLLVQAQRDWVKFRDAECSFQTASAAGGSVMPMLTATCMESLTQVRVEAFEGYL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC NCEEGDLSCPVPTAN CCCCCCCCCCCCCCC >Mature Secondary Structure MRTIILATVMMLAIPASAFAQDNCSAAEDQATMNECADAAFREADKKLNELYKQIEARLS CHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DDAETKNLLVQAQRDWVKFRDAECSFQTASAAGGSVMPMLTATCMESLTQVRVEAFEGYL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC NCEEGDLSCPVPTAN CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA