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The map label for this gene is ybhN [C]

Identifier: 110634826

GI number: 110634826

Start: 2663435

End: 2664367

Strand: Reverse

Name: ybhN [C]

Synonym: Meso_2485

Alternate gene names: 110634826

Gene position: 2664367-2663435 (Counterclockwise)

Preceding gene: 110634827

Following gene: 110634822

Centisome position: 60.38

GC content: 56.91

Gene sequence:

>933_bases
ATGCAGCTAAAGAGATATATCTGGCCGATAATCGGCTTTGCCGCGGTGGTTTTTTCTGCCTGGCTTCTCTACCACGAATT
ACGAGGGCTTTCGCTCGATGAGCTCTGGGGTAGTCTCGCCGCCATTCCAATGCCTAACTGGCTGTTGTGCGTGGCTTCCA
CGCTTTTGGCCTATGGCGCGCTGGCAGCGTATGATCATCTGGCGCTTACACATCTGAGAAAACGGGTGGGCTGGCTTTAT
ATCACCGTCACCTCGTTCACCACCTATGCGTTTTCACACAATATCGGCGCGTCGGTGTTTTCCGGCTCCGTTGTCCGCTA
CAGGGCCTATACCGCCAAGGGGCTGACCGGAGCCGAGGTCGGGGTGCTGGTGGCGTTCTGCTCTTTTACCTTTGCTCTAG
GTATTGTCGTCCTCACCGGCGTCGTGCTGTTAGTGGAACCAGGAATCGCAGACCGCTTCGTCGACGTGCTCCCGGTGGAG
GCATCGGCGGTGACTGGTGCGCTATTGCTGGTCGGAGTTCTGCTTTATGTGGTGGGCAGCGCGTTGAAATTCAGGCCATT
GCATATCGGCAAGGTCGAGCTGTCATATCCGCGTCTTTCGATTGCACTGAAGCAACTGCTGATCGGCCCGTTGGAGATCA
TCGGCGCGGCAGCGATTATCTATTTTGCGCTGCCCGCAGCAGGCAATCCGGGCTTTGTTACCATCACCGGCATTTTCCTG
ATCTCGTTTTCGCTGGCGCTTCTTTCGCACGCTCCGGGCGGGTTGGGGGTGCTTGAACTTGCTTTCATCTCCGGCTTGCC
CGAGATGGACCCGGCCGACGTGCTGGCTGCCCTGCTGGTCTTCAGGCTGCTATATCTCATCATCCCATTTATCGCCGCTT
TGATCGTTGTTCTCGGCTTTGAGCGCCAGCAATTCGCGAACGAGCGGGCTTGA

Upstream 100 bases:

>100_bases
TTCGTCCCCTTCCCGCCGAGTGAGTGGAGAGCGGAGGCTTTCTCTTACGGCACACCGGGCCGGTTGGCTACATCCCGTAA
GCACCAGCGGGCATTAAGCA

Downstream 100 bases:

>100_bases
GGCTCACGATATAAAGCGCCGGTCGGTGCCATCGGGGGCGCCTCGGGCATGATCGTCAATTCTCGTTACGAGCCCAAGCC
GCCAGAGGAAAACCGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MQLKRYIWPIIGFAAVVFSAWLLYHELRGLSLDELWGSLAAIPMPNWLLCVASTLLAYGALAAYDHLALTHLRKRVGWLY
ITVTSFTTYAFSHNIGASVFSGSVVRYRAYTAKGLTGAEVGVLVAFCSFTFALGIVVLTGVVLLVEPGIADRFVDVLPVE
ASAVTGALLLVGVLLYVVGSALKFRPLHIGKVELSYPRLSIALKQLLIGPLEIIGAAAIIYFALPAAGNPGFVTITGIFL
ISFSLALLSHAPGGLGVLELAFISGLPEMDPADVLAALLVFRLLYLIIPFIAALIVVLGFERQQFANERA

Sequences:

>Translated_310_residues
MQLKRYIWPIIGFAAVVFSAWLLYHELRGLSLDELWGSLAAIPMPNWLLCVASTLLAYGALAAYDHLALTHLRKRVGWLY
ITVTSFTTYAFSHNIGASVFSGSVVRYRAYTAKGLTGAEVGVLVAFCSFTFALGIVVLTGVVLLVEPGIADRFVDVLPVE
ASAVTGALLLVGVLLYVVGSALKFRPLHIGKVELSYPRLSIALKQLLIGPLEIIGAAAIIYFALPAAGNPGFVTITGIFL
ISFSLALLSHAPGGLGVLELAFISGLPEMDPADVLAALLVFRLLYLIIPFIAALIVVLGFERQQFANERA
>Mature_310_residues
MQLKRYIWPIIGFAAVVFSAWLLYHELRGLSLDELWGSLAAIPMPNWLLCVASTLLAYGALAAYDHLALTHLRKRVGWLY
ITVTSFTTYAFSHNIGASVFSGSVVRYRAYTAKGLTGAEVGVLVAFCSFTFALGIVVLTGVVLLVEPGIADRFVDVLPVE
ASAVTGALLLVGVLLYVVGSALKFRPLHIGKVELSYPRLSIALKQLLIGPLEIIGAAAIIYFALPAAGNPGFVTITGIFL
ISFSLALLSHAPGGLGVLELAFISGLPEMDPADVLAALLVFRLLYLIIPFIAALIVVLGFERQQFANERA

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhN [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=283, Percent_Identity=28.9752650176678, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 33261; Mature: 33261

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKRYIWPIIGFAAVVFSAWLLYHELRGLSLDELWGSLAAIPMPNWLLCVASTLLAYGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAAYDHLALTHLRKRVGWLYITVTSFTTYAFSHNIGASVFSGSVVRYRAYTAKGLTGAEV
HHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHCCCCHHHHCCCCCEEEEHHCCCCCCHHH
GVLVAFCSFTFALGIVVLTGVVLLVEPGIADRFVDVLPVEASAVTGALLLVGVLLYVVGS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
ALKFRPLHIGKVELSYPRLSIALKQLLIGPLEIIGAAAIIYFALPAAGNPGFVTITGIFL
HHEECCEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH
ISFSLALLSHAPGGLGVLELAFISGLPEMDPADVLAALLVFRLLYLIIPFIAALIVVLGF
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ERQQFANERA
CHHHHCCCCC
>Mature Secondary Structure
MQLKRYIWPIIGFAAVVFSAWLLYHELRGLSLDELWGSLAAIPMPNWLLCVASTLLAYGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAAYDHLALTHLRKRVGWLYITVTSFTTYAFSHNIGASVFSGSVVRYRAYTAKGLTGAEV
HHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHCCCCHHHHCCCCCEEEEHHCCCCCCHHH
GVLVAFCSFTFALGIVVLTGVVLLVEPGIADRFVDVLPVEASAVTGALLLVGVLLYVVGS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
ALKFRPLHIGKVELSYPRLSIALKQLLIGPLEIIGAAAIIYFALPAAGNPGFVTITGIFL
HHEECCEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH
ISFSLALLSHAPGGLGVLELAFISGLPEMDPADVLAALLVFRLLYLIIPFIAALIVVLGF
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ERQQFANERA
CHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]