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The map label for this gene is oxyR [H]

Identifier: 110634803

GI number: 110634803

Start: 2639198

End: 2640082

Strand: Direct

Name: oxyR [H]

Synonym: Meso_2462

Alternate gene names: 110634803

Gene position: 2639198-2640082 (Clockwise)

Preceding gene: 110634799

Following gene: 110634804

Centisome position: 59.81

GC content: 60.0

Gene sequence:

>885_bases
ATGGAAATGCACGAAATACGGTATTTCCTCGCGGCCAGCCGCACGCTGAACTTTCATCGGGCCGCGGAGTTGGCGCATGT
CACACAACCGGCTCTGACCCGGGCCATCCAAAAGCTTGAAGCAGAACTCGGCGGCCTGCTGTTTTACCGCGAACGCAACC
ACGTCCAGCTTACCGATTTCGGCTGCGTCATGCGAAGCCATCTGGAGGAGGTTGTCCGGCGATCGGAGGTAGCCAAGGAA
ACGGCGCGGGATTTCCTGAAACTGGAAGCGGCACTCCTGAAGCTTGGGGTCATGTGCACGATCGGCCCCTTACGTTTCGT
GGGCTTCCTCAACGCCTTTCACCAGACCAATCCGAGCGTTGGCGTTACGGTCGTGGAAGGCGTGCCATCCCGCCTTGCCG
CGCTTCTTCTCGAAGGTAAGCTGGACGTTGCGCTGATGGCGCAGCCGCAGCCTTTTGACGAGCGGCTACGGACAGAACCC
ATCTACGCGGAGCGCTTCGGGCTGGCTTTCTGCACCGGTCATCCCTTTGAAAAGCGCAATACGCTCCACCTGAGCGATGT
TGAGTGCGCGCCTTACCTCGACCGCATCAATTGCGAATACAGCGACAATATCGGCGCGTTGTGCAGTGAGCGCGGCATTC
GCATTACCGTCGCCTATCGAAGCGAGCGGGAAGACTGGATAATGGCCATGGTGGCTGCCGGAATGGGTATCTGCTTCTCG
CCCGAATTCTCCGCCTGCCTGCCGGGCGTGTGCCACCGCCCCGTTGCCGATCCGGAAATAGTGAGGAAGGTTTCGCTCGT
CTCTGTCGCAGGGCGCGTTCCCTCACCCGCCGTGAAAGCCTTCCGGGAGGCAGTTTGCAACTACGACTGGACCCAGCCTA
GATGA

Upstream 100 bases:

>100_bases
CAATCAAATGCAGCGGAGAGTTTACAGACGCGGACAAATGGCGAAAAATGCCAAGAATTCATCGCAATGATGCATCGCTT
GCATCGGCGGGAGAACTCCC

Downstream 100 bases:

>100_bases
CAGCCCTTCCTTCGACTGGATCGTGATTGCAAGATATCAGCCCTTCCGAAATCATCGGCCTGACGGACTTCGTCTGTTCA
GGAAAGGCGATGTCGAACAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MEMHEIRYFLAASRTLNFHRAAELAHVTQPALTRAIQKLEAELGGLLFYRERNHVQLTDFGCVMRSHLEEVVRRSEVAKE
TARDFLKLEAALLKLGVMCTIGPLRFVGFLNAFHQTNPSVGVTVVEGVPSRLAALLLEGKLDVALMAQPQPFDERLRTEP
IYAERFGLAFCTGHPFEKRNTLHLSDVECAPYLDRINCEYSDNIGALCSERGIRITVAYRSEREDWIMAMVAAGMGICFS
PEFSACLPGVCHRPVADPEIVRKVSLVSVAGRVPSPAVKAFREAVCNYDWTQPR

Sequences:

>Translated_294_residues
MEMHEIRYFLAASRTLNFHRAAELAHVTQPALTRAIQKLEAELGGLLFYRERNHVQLTDFGCVMRSHLEEVVRRSEVAKE
TARDFLKLEAALLKLGVMCTIGPLRFVGFLNAFHQTNPSVGVTVVEGVPSRLAALLLEGKLDVALMAQPQPFDERLRTEP
IYAERFGLAFCTGHPFEKRNTLHLSDVECAPYLDRINCEYSDNIGALCSERGIRITVAYRSEREDWIMAMVAAGMGICFS
PEFSACLPGVCHRPVADPEIVRKVSLVSVAGRVPSPAVKAFREAVCNYDWTQPR
>Mature_294_residues
MEMHEIRYFLAASRTLNFHRAAELAHVTQPALTRAIQKLEAELGGLLFYRERNHVQLTDFGCVMRSHLEEVVRRSEVAKE
TARDFLKLEAALLKLGVMCTIGPLRFVGFLNAFHQTNPSVGVTVVEGVPSRLAALLLEGKLDVALMAQPQPFDERLRTEP
IYAERFGLAFCTGHPFEKRNTLHLSDVECAPYLDRINCEYSDNIGALCSERGIRITVAYRSEREDWIMAMVAAGMGICFS
PEFSACLPGVCHRPVADPEIVRKVSLVSVAGRVPSPAVKAFREAVCNYDWTQPR

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=281, Percent_Identity=30.6049822064057, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787601, Length=177, Percent_Identity=29.3785310734463, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI2367136, Length=286, Percent_Identity=28.3216783216783, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787879, Length=293, Percent_Identity=25.2559726962457, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI157672245, Length=280, Percent_Identity=25.7142857142857, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788887, Length=268, Percent_Identity=24.6268656716418, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI145693105, Length=305, Percent_Identity=22.9508196721311, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787530, Length=265, Percent_Identity=20.7547169811321, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788296, Length=229, Percent_Identity=22.2707423580786, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32922; Mature: 32922

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMHEIRYFLAASRTLNFHRAAELAHVTQPALTRAIQKLEAELGGLLFYRERNHVQLTDF
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEHHH
GCVMRSHLEEVVRRSEVAKETARDFLKLEAALLKLGVMCTIGPLRFVGFLNAFHQTNPSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVTVVEGVPSRLAALLLEGKLDVALMAQPQPFDERLRTEPIYAERFGLAFCTGHPFEKRN
CEEEECCCHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHCEEEECCCCCCCCC
TLHLSDVECAPYLDRINCEYSDNIGALCSERGIRITVAYRSEREDWIMAMVAAGMGICFS
CEEECCCCCCCHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEC
PEFSACLPGVCHRPVADPEIVRKVSLVSVAGRVPSPAVKAFREAVCNYDWTQPR
CCHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEMHEIRYFLAASRTLNFHRAAELAHVTQPALTRAIQKLEAELGGLLFYRERNHVQLTDF
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEHHH
GCVMRSHLEEVVRRSEVAKETARDFLKLEAALLKLGVMCTIGPLRFVGFLNAFHQTNPSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVTVVEGVPSRLAALLLEGKLDVALMAQPQPFDERLRTEPIYAERFGLAFCTGHPFEKRN
CEEEECCCHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHCEEEECCCCCCCCC
TLHLSDVECAPYLDRINCEYSDNIGALCSERGIRITVAYRSEREDWIMAMVAAGMGICFS
CEEECCCCCCCHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEC
PEFSACLPGVCHRPVADPEIVRKVSLVSVAGRVPSPAVKAFREAVCNYDWTQPR
CCHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA