| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634608
Identifier: 110634608
GI number: 110634608
Start: 2416289
End: 2416756
Strand: Direct
Name: 110634608
Synonym: Meso_2262
Alternate gene names: NA
Gene position: 2416289-2416756 (Clockwise)
Preceding gene: 110634607
Following gene: 110634611
Centisome position: 54.76
GC content: 60.9
Gene sequence:
>468_bases ATGACGCGAAAGAGCGCCGGCATCTTGCCCTACAGGCTTAGATTCGGCGACGTACAGGTCTTGCTCGTTCACCCGGGCGG CCCGTTCTGGCGTAACCGGGATGAGGGAGCGTGGTCGATCGCAAAGGGAGAGTATGCCGACAGCGAGCACCCCGAATTCG CTGCACGCCGGGAATTCACTGAAGAAACCGGATGGGAGGCAATTGGAGCGGTGTCGCCACTCGGGGAGATCCGTCAGGCA GGCGGGAAATACGTCACCGCCTTCGCCTTGAATGCCGACTTCGAGCCCCAAACGTTGAACAGCCATGCGTTCGAACTCGA GTGGCCGCCGAACAGCGGCCGGATGCAAGTCTTCCCGGAGGTCGATCGCGCAGAATGGTTCGGCTTCGAGAAGGCACGGG GAAAGATTATTGCCGGCCAGCGTCCTTTTCTCGATCGGCTGTATGTGCTGTGCCGGGACGAGCACTGA
Upstream 100 bases:
>100_bases TCAGCATCGCGGAAGTGCAACACGATTGGCGGATTGTTTCGTTGACGCGGATCAAGGGGAGCGGCCGGCGACTCCATGTA GAAGAGGTGGAGAACGGCGA
Downstream 100 bases:
>100_bases TAGACGAATTCTGGTGCCAAGACGTTCGATGGCTACGGTGCAGCCCTGTTTGGCGACATCCCGGCTCAACCGATGCGGTC GGTTGGCTAACCCGGGACGA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT-Like Protein; MutT/Nudix Family Protein; Phosphohydrolase; NTP Pyrophosphohydrolase Protein; NUDIX Hydrolase Family Protein; NUDIX Domain-Contain Protein; NTP Pyrophosphohydrolase; MutT Protein; Hydrolase NUDIX Family; MutT-Like Domain-Containing Protein; NUDIX Family Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTRKSAGILPYRLRFGDVQVLLVHPGGPFWRNRDEGAWSIAKGEYADSEHPEFAARREFTEETGWEAIGAVSPLGEIRQA GGKYVTAFALNADFEPQTLNSHAFELEWPPNSGRMQVFPEVDRAEWFGFEKARGKIIAGQRPFLDRLYVLCRDEH
Sequences:
>Translated_155_residues MTRKSAGILPYRLRFGDVQVLLVHPGGPFWRNRDEGAWSIAKGEYADSEHPEFAARREFTEETGWEAIGAVSPLGEIRQA GGKYVTAFALNADFEPQTLNSHAFELEWPPNSGRMQVFPEVDRAEWFGFEKARGKIIAGQRPFLDRLYVLCRDEH >Mature_154_residues TRKSAGILPYRLRFGDVQVLLVHPGGPFWRNRDEGAWSIAKGEYADSEHPEFAARREFTEETGWEAIGAVSPLGEIRQAG GKYVTAFALNADFEPQTLNSHAFELEWPPNSGRMQVFPEVDRAEWFGFEKARGKIIAGQRPFLDRLYVLCRDEH
Specific function: Unknown
COG id: COG4119
COG function: function code LR; Predicted NTP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17640; Mature: 17509
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKSAGILPYRLRFGDVQVLLVHPGGPFWRNRDEGAWSIAKGEYADSEHPEFAARREFT CCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHH EETGWEAIGAVSPLGEIRQAGGKYVTAFALNADFEPQTLNSHAFELEWPPNSGRMQVFPE HHCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEC VDRAEWFGFEKARGKIIAGQRPFLDRLYVLCRDEH CCCHHHCCCHHHCCEEEECCCCHHHHEEEEEECCC >Mature Secondary Structure TRKSAGILPYRLRFGDVQVLLVHPGGPFWRNRDEGAWSIAKGEYADSEHPEFAARREFT CCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHH EETGWEAIGAVSPLGEIRQAGGKYVTAFALNADFEPQTLNSHAFELEWPPNSGRMQVFPE HHCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEC VDRAEWFGFEKARGKIIAGQRPFLDRLYVLCRDEH CCCHHHCCCHHHCCEEEECCCCHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA