| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110634554
Identifier: 110634554
GI number: 110634554
Start: 2354049
End: 2355173
Strand: Reverse
Name: 110634554
Synonym: Meso_2205
Alternate gene names: NA
Gene position: 2355173-2354049 (Counterclockwise)
Preceding gene: 110634555
Following gene: 110634553
Centisome position: 53.38
GC content: 60.27
Gene sequence:
>1125_bases GTGCTCGAATCCATCGTTGGTTTCTTTACGCGGGTGTTTGCGGCCATCGGCAAGGGGATCGGCTGGTTCATCTACTGGCT TGCATGGCCGTTCATGGCACTCGGGCGCTGGTTCATGCGAAGCGGATGGATCGCACGCGGCGTCGTAGCCGCTTTTCTCG TCATCTTTGTCGGGCTCTACATTTATTTCTTCTCGCAGACCCAGGTCTGGACCGGCTTCAACCCGGACTATGTACAGGCC TATGACGCCGACAGACGTGGAGCAGCGCCCGGCGAACAGCTGGCGGCGACGTCCGCAGGGCAGGCACCGCAAAGCTGTGC TCCTTCAGCCATCGCAGAGGTGGCGGCCGATCTCACGGACTTCAACGTCAACCAGAATGCCTGGATCTCTTCGATGATCC TCTACAAGCTGGGCTTCTTCGGCCTGGACTGGGACAGCACGCCCTATTTCGACAACAAGGCTTCGTTCCAGCGGGGCGTG AACCAGGCGGTCCGCCGCACCACGGTGGAACTGGTGGACGCGCTGGGCCGCGTCCGCGGCACGTCCCAGATCGATAGCGA TCTGCAGAAGGCGCGCGAGAGCATGCAGTTCAGCGAAGACGCCTGGTATTTCGGTCTCAATCCCTTCGGCCCGAAAACGC CGACGCCAAGCTTCTACCGAACCGCCATTTCGTCTCTGCGCAGCTTCAATACGCGTCTCGCAAACTGCGAGGCCACGTTT GACGCGCGCGCCGACAATCTCATCCAGTTCCTCGATCGCATCGCCAGCGATCTGGGCTCGACATCGGCCATTCTGCGCGA GCGGTCGGAGAACTATAACGCCGGCTGGCTGGATACCCGCGCGGATGACCGGTTCTGGTTCGCCTATGGCCAGCTCTACG GCTATTACGGGATACTGCACGCGGCAAGGATCGATTTTGACGGCGTCATTACGCAGCGTTCGCTGGGGCCTCTCTGGGAT CAGACCGAAAGCCAGTTTCGCGCCGCCCTCAACATCACTCCCTTCATCATATCCAACGGGCGGGAAGACGGCTGGATAAT GCCGACGCATCTTGCCACGATGGGATTTTACATCCTGCGTGCGCGCTCGAACCTGGTCGAGCTGAGGGATGTTCTGGATA GATGA
Upstream 100 bases:
>100_bases ACGTGCGGCTTGCCGCGGGCCTGCATTGTGATGGAGCCCAAAACCGCCTATCTGAAATGGACTTGGCGCCGGCGAGGCGC TGTCGTGTCAGGGGGTGCCG
Downstream 100 bases:
>100_bases GTGACGACTAGGAAGTAGCGAATAGCGGATTGGGCCGGTTGACAGGCCCGCGCCCATTCGGGCCATCTATTCGCTAATTC CTACTTGCTATTCGCGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MLESIVGFFTRVFAAIGKGIGWFIYWLAWPFMALGRWFMRSGWIARGVVAAFLVIFVGLYIYFFSQTQVWTGFNPDYVQA YDADRRGAAPGEQLAATSAGQAPQSCAPSAIAEVAADLTDFNVNQNAWISSMILYKLGFFGLDWDSTPYFDNKASFQRGV NQAVRRTTVELVDALGRVRGTSQIDSDLQKARESMQFSEDAWYFGLNPFGPKTPTPSFYRTAISSLRSFNTRLANCEATF DARADNLIQFLDRIASDLGSTSAILRERSENYNAGWLDTRADDRFWFAYGQLYGYYGILHAARIDFDGVITQRSLGPLWD QTESQFRAALNITPFIISNGREDGWIMPTHLATMGFYILRARSNLVELRDVLDR
Sequences:
>Translated_374_residues MLESIVGFFTRVFAAIGKGIGWFIYWLAWPFMALGRWFMRSGWIARGVVAAFLVIFVGLYIYFFSQTQVWTGFNPDYVQA YDADRRGAAPGEQLAATSAGQAPQSCAPSAIAEVAADLTDFNVNQNAWISSMILYKLGFFGLDWDSTPYFDNKASFQRGV NQAVRRTTVELVDALGRVRGTSQIDSDLQKARESMQFSEDAWYFGLNPFGPKTPTPSFYRTAISSLRSFNTRLANCEATF DARADNLIQFLDRIASDLGSTSAILRERSENYNAGWLDTRADDRFWFAYGQLYGYYGILHAARIDFDGVITQRSLGPLWD QTESQFRAALNITPFIISNGREDGWIMPTHLATMGFYILRARSNLVELRDVLDR >Mature_374_residues MLESIVGFFTRVFAAIGKGIGWFIYWLAWPFMALGRWFMRSGWIARGVVAAFLVIFVGLYIYFFSQTQVWTGFNPDYVQA YDADRRGAAPGEQLAATSAGQAPQSCAPSAIAEVAADLTDFNVNQNAWISSMILYKLGFFGLDWDSTPYFDNKASFQRGV NQAVRRTTVELVDALGRVRGTSQIDSDLQKARESMQFSEDAWYFGLNPFGPKTPTPSFYRTAISSLRSFNTRLANCEATF DARADNLIQFLDRIASDLGSTSAILRERSENYNAGWLDTRADDRFWFAYGQLYGYYGILHAARIDFDGVITQRSLGPLWD QTESQFRAALNITPFIISNGREDGWIMPTHLATMGFYILRARSNLVELRDVLDR
Specific function: Unknown
COG id: COG5345
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42225; Mature: 42225
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESIVGFFTRVFAAIGKGIGWFIYWLAWPFMALGRWFMRSGWIARGVVAAFLVIFVGLY CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IYFFSQTQVWTGFNPDYVQAYDADRRGAAPGEQLAATSAGQAPQSCAPSAIAEVAADLTD HHHHCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH FNVNQNAWISSMILYKLGFFGLDWDSTPYFDNKASFQRGVNQAVRRTTVELVDALGRVRG CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSQIDSDLQKARESMQFSEDAWYFGLNPFGPKTPTPSFYRTAISSLRSFNTRLANCEATF CHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH DARADNLIQFLDRIASDLGSTSAILRERSENYNAGWLDTRADDRFWFAYGQLYGYYGILH HCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AARIDFDGVITQRSLGPLWDQTESQFRAALNITPFIISNGREDGWIMPTHLATMGFYILR HHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHH ARSNLVELRDVLDR HHHHHHHHHHHHCC >Mature Secondary Structure MLESIVGFFTRVFAAIGKGIGWFIYWLAWPFMALGRWFMRSGWIARGVVAAFLVIFVGLY CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IYFFSQTQVWTGFNPDYVQAYDADRRGAAPGEQLAATSAGQAPQSCAPSAIAEVAADLTD HHHHCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH FNVNQNAWISSMILYKLGFFGLDWDSTPYFDNKASFQRGVNQAVRRTTVELVDALGRVRG CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSQIDSDLQKARESMQFSEDAWYFGLNPFGPKTPTPSFYRTAISSLRSFNTRLANCEATF CHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH DARADNLIQFLDRIASDLGSTSAILRERSENYNAGWLDTRADDRFWFAYGQLYGYYGILH HCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AARIDFDGVITQRSLGPLWDQTESQFRAALNITPFIISNGREDGWIMPTHLATMGFYILR HHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHH ARSNLVELRDVLDR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA