| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is fhs
Identifier: 110634553
GI number: 110634553
Start: 2352263
End: 2353942
Strand: Reverse
Name: fhs
Synonym: Meso_2204
Alternate gene names: 110634553
Gene position: 2353942-2352263 (Counterclockwise)
Preceding gene: 110634554
Following gene: 110634549
Centisome position: 53.35
GC content: 61.43
Gene sequence:
>1680_bases ATGGCAGATGTGAAGTCAGATATCGAGATCGCCCGCGCGGCGAGGAAGAAGCCGATCCAGGAGATTGGGGCGGGGCTGGG CATCGCGTCTGAGCACCTTCTGCCTTACGGCCACGACAAGGCGAAGGTGTCGGCCGAGTTTATCGCTGAGGCTCGAAAAA GGCCGGACGGAAGGCTGATCCTCGTCACCGCGATTAATCCGACCCCGGCAGGCGAGGGCAAGACGACCACAACGGTCGGC CTTGGCGACGGCCTCAACCGCATCGGCAAGAAGGCGATCGTCTGCATCCGCGAAGCCTCGCTCGGCCCCTGCTTCGGCAT GAAGGGCGGGGCGGCGGGCGGCGGTTACGCGCAGGTGATCCCGATGGAAGACATCAACCTCCACTTCACCGGCGATTTTC ATGCGGTCACCTCCGCCCACAATCTGCTCTCTGCCCTGATCGACAACCACATCTATTGGGGAAATGAGCTTGGCATCGAC ACGCGCCGGGTGACCTGGCGGCGCGTGATGGATATGAACGACCGCGCGCTGCGTGAGATCGTCTGCTCCCTCGGCGGTGT CGCCAACGGCTATCCGCGCGAAGGGGGATTTGACATCACCGTCGCCTCGGAGGTGATGGCGATCCTTTGCCTGGCAAAGG ATCTCGGCGATCTCGAAAAACGGCTGGGTGACATCATCGTCGCCTACCGGCGCGACAAAAGCCCTGTCTTCGCGCGCGAC CTCAAGGCCGACGGAGCGATGGCCGTCCTCCTCAGGGATGCGTTGCAGCCGAACCTGGTTCAGACGCTGGAAAACAACCC GGCCTTCGTCCATGGCGGGCCTTTCGCCAATATTGCCCATGGCTGCAATTCAGTGATGGCCACGAGCACTGCGCTGAAAC TGGCGGACTATGTGGTCACGGAAGCGGGGTTTGGGGCGGACCTCGGCGCCGAGAAGTTCTTCGATATCAAATGCCGGAAG ACCGGTCTTAAGCCTGCCGCGGCGGTCATCGTTGCTACCGTGCGCGCGCTTAAAATGAATGGAGGCGTGAAGAAGGAAGA TCTCGGCGCGGAAGATGTCGATGCCCTCATCAGGGGATGCGCCAATCTTGGCCGTCACATCGAAAACATAAAGCAGTTCG GCGTTCCAGCTATCGTTGCCATCAACCATTTTGAAACCGACACTCCGGCGGAAATAGAGGCCGTGAGGGCCTATGTGGGG GCGCAAGGCGAAGAGGCGGTGCTTTGCCGGCATTGGGCGGAAGGCTCGGCCGGCATCGAGGAACTGGCTCATAAGGTCGT GGCGTTGGCGGAGAGCCGCGCTTCCCAGTTCGCACCGCTCTATCCCGACAACATGCCGCTGTTCGAAAAGATCAATACGA TCGTGCGGCGGATCTACCGAGGTTCACGCGCGGTGGCCGACGGCACCGTGCTCGCCCAGCTTAAGCAATGGGAAGACCAG GGCTATGGGCATCTTCCGGTCTGCATGGCCAAGACCCAATATTCCTTCTCCACCGATTCCAATCTGCGCGGGGCGCCGGT GGATCACGTCGTCCCGGTGCGGGAAGTGCGGCTTTCCGCAGGGGCCGGCTTCGTGGTCGCGATCTGCGGTGAGATCATGA CCATGCCGGGCCTGCCGCGCGCGCCCTCGGCCGAGAAGATATTTCTCAATGAGGCCGGCTACATAGAAGGTCTTTTTTAA
Upstream 100 bases:
>100_bases ACTAGGAAGTAGCGAATAGCGGATTGGGCCGGTTGACAGGCCCGCGCCCATTCGGGCCATCTATTCGCTAATTCCTACTT GCTATTCGCGGGGGGTGCTC
Downstream 100 bases:
>100_bases TCAGAACAATAGGTCAGGCCGCGTTTGGGCCCGGATCATCTCCGTCCGGACGCTTTAGAGACTTCTGGTGAAGGCCGGTT TCCGCCTGATTTCCACCTTC
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MADVKSDIEIARAARKKPIQEIGAGLGIASEHLLPYGHDKAKVSAEFIAEARKRPDGRLILVTAINPTPAGEGKTTTTVG LGDGLNRIGKKAIVCIREASLGPCFGMKGGAAGGGYAQVIPMEDINLHFTGDFHAVTSAHNLLSALIDNHIYWGNELGID TRRVTWRRVMDMNDRALREIVCSLGGVANGYPREGGFDITVASEVMAILCLAKDLGDLEKRLGDIIVAYRRDKSPVFARD LKADGAMAVLLRDALQPNLVQTLENNPAFVHGGPFANIAHGCNSVMATSTALKLADYVVTEAGFGADLGAEKFFDIKCRK TGLKPAAAVIVATVRALKMNGGVKKEDLGAEDVDALIRGCANLGRHIENIKQFGVPAIVAINHFETDTPAEIEAVRAYVG AQGEEAVLCRHWAEGSAGIEELAHKVVALAESRASQFAPLYPDNMPLFEKINTIVRRIYRGSRAVADGTVLAQLKQWEDQ GYGHLPVCMAKTQYSFSTDSNLRGAPVDHVVPVREVRLSAGAGFVVAICGEIMTMPGLPRAPSAEKIFLNEAGYIEGLF
Sequences:
>Translated_559_residues MADVKSDIEIARAARKKPIQEIGAGLGIASEHLLPYGHDKAKVSAEFIAEARKRPDGRLILVTAINPTPAGEGKTTTTVG LGDGLNRIGKKAIVCIREASLGPCFGMKGGAAGGGYAQVIPMEDINLHFTGDFHAVTSAHNLLSALIDNHIYWGNELGID TRRVTWRRVMDMNDRALREIVCSLGGVANGYPREGGFDITVASEVMAILCLAKDLGDLEKRLGDIIVAYRRDKSPVFARD LKADGAMAVLLRDALQPNLVQTLENNPAFVHGGPFANIAHGCNSVMATSTALKLADYVVTEAGFGADLGAEKFFDIKCRK TGLKPAAAVIVATVRALKMNGGVKKEDLGAEDVDALIRGCANLGRHIENIKQFGVPAIVAINHFETDTPAEIEAVRAYVG AQGEEAVLCRHWAEGSAGIEELAHKVVALAESRASQFAPLYPDNMPLFEKINTIVRRIYRGSRAVADGTVLAQLKQWEDQ GYGHLPVCMAKTQYSFSTDSNLRGAPVDHVVPVREVRLSAGAGFVVAICGEIMTMPGLPRAPSAEKIFLNEAGYIEGLF >Mature_558_residues ADVKSDIEIARAARKKPIQEIGAGLGIASEHLLPYGHDKAKVSAEFIAEARKRPDGRLILVTAINPTPAGEGKTTTTVGL GDGLNRIGKKAIVCIREASLGPCFGMKGGAAGGGYAQVIPMEDINLHFTGDFHAVTSAHNLLSALIDNHIYWGNELGIDT RRVTWRRVMDMNDRALREIVCSLGGVANGYPREGGFDITVASEVMAILCLAKDLGDLEKRLGDIIVAYRRDKSPVFARDL KADGAMAVLLRDALQPNLVQTLENNPAFVHGGPFANIAHGCNSVMATSTALKLADYVVTEAGFGADLGAEKFFDIKCRKT GLKPAAAVIVATVRALKMNGGVKKEDLGAEDVDALIRGCANLGRHIENIKQFGVPAIVAINHFETDTPAEIEAVRAYVGA QGEEAVLCRHWAEGSAGIEELAHKVVALAESRASQFAPLYPDNMPLFEKINTIVRRIYRGSRAVADGTVLAQLKQWEDQG YGHLPVCMAKTQYSFSTDSNLRGAPVDHVVPVREVRLSAGAGFVVAICGEIMTMPGLPRAPSAEKIFLNEAGYIEGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=621, Percent_Identity=41.5458937198068, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI36796743, Length=625, Percent_Identity=42.4, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI310124614, Length=86, Percent_Identity=34.8837209302326, Blast_Score=69, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17568737, Length=633, Percent_Identity=42.1800947867299, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17568739, Length=633, Percent_Identity=42.1800947867299, Blast_Score=439, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=43.9297124600639, Blast_Score=457, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6319558, Length=633, Percent_Identity=41.390205371248, Blast_Score=448, Evalue=1e-127, Organism=Drosophila melanogaster, GI24645718, Length=621, Percent_Identity=42.9951690821256, Blast_Score=456, Evalue=1e-128, Organism=Drosophila melanogaster, GI17137370, Length=621, Percent_Identity=42.9951690821256, Blast_Score=456, Evalue=1e-128, Organism=Drosophila melanogaster, GI62472483, Length=621, Percent_Identity=42.9951690821256, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI45551871, Length=621, Percent_Identity=42.9951690821256, Blast_Score=454, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_MESSB (Q11G79)
Other databases:
- EMBL: CP000390 - RefSeq: YP_674761.1 - ProteinModelPortal: Q11G79 - SMR: Q11G79 - STRING: Q11G79 - GeneID: 4181898 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_2204 - NMPDR: fig|266779.1.peg.1786 - eggNOG: COG2759 - HOGENOM: HBG677721 - OMA: EIMAVLC - PhylomeDB: Q11G79 - ProtClustDB: PRK13505 - BioCyc: MSP266779:MESO_2204-MONOMER - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 59887; Mature: 59755
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVKSDIEIARAARKKPIQEIGAGLGIASEHLLPYGHDKAKVSAEFIAEARKRPDGRLI CCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEE LVTAINPTPAGEGKTTTTVGLGDGLNRIGKKAIVCIREASLGPCFGMKGGAAGGGYAQVI EEEEECCCCCCCCCCEEEEECCCCHHHHCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEE PMEDINLHFTGDFHAVTSAHNLLSALIDNHIYWGNELGIDTRRVTWRRVMDMNDRALREI EECCCEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHH VCSLGGVANGYPREGGFDITVASEVMAILCLAKDLGDLEKRLGDIIVAYRRDKSPVFARD HHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHH LKADGAMAVLLRDALQPNLVQTLENNPAFVHGGPFANIAHGCNSVMATSTALKLADYVVT CCCCCHHHHHHHHHCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAGFGADLGAEKFFDIKCRKTGLKPAAAVIVATVRALKMNGGVKKEDLGAEDVDALIRGC CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH ANLGRHIENIKQFGVPAIVAINHFETDTPAEIEAVRAYVGAQGEEAVLCRHWAEGSAGIE HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEHHCCCCCCCHH ELAHKVVALAESRASQFAPLYPDNMPLFEKINTIVRRIYRGSRAVADGTVLAQLKQWEDQ HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC GYGHLPVCMAKTQYSFSTDSNLRGAPVDHVVPVREVRLSAGAGFVVAICGEIMTMPGLPR CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC APSAEKIFLNEAGYIEGLF CCCCCEEEEECCCCCCCCC >Mature Secondary Structure ADVKSDIEIARAARKKPIQEIGAGLGIASEHLLPYGHDKAKVSAEFIAEARKRPDGRLI CCCHHHHHHHHHHHCCCHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEE LVTAINPTPAGEGKTTTTVGLGDGLNRIGKKAIVCIREASLGPCFGMKGGAAGGGYAQVI EEEEECCCCCCCCCCEEEEECCCCHHHHCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEE PMEDINLHFTGDFHAVTSAHNLLSALIDNHIYWGNELGIDTRRVTWRRVMDMNDRALREI EECCCEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHH VCSLGGVANGYPREGGFDITVASEVMAILCLAKDLGDLEKRLGDIIVAYRRDKSPVFARD HHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHH LKADGAMAVLLRDALQPNLVQTLENNPAFVHGGPFANIAHGCNSVMATSTALKLADYVVT CCCCCHHHHHHHHHCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAGFGADLGAEKFFDIKCRKTGLKPAAAVIVATVRALKMNGGVKKEDLGAEDVDALIRGC CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH ANLGRHIENIKQFGVPAIVAINHFETDTPAEIEAVRAYVGAQGEEAVLCRHWAEGSAGIE HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEHHCCCCCCCHH ELAHKVVALAESRASQFAPLYPDNMPLFEKINTIVRRIYRGSRAVADGTVLAQLKQWEDQ HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC GYGHLPVCMAKTQYSFSTDSNLRGAPVDHVVPVREVRLSAGAGFVVAICGEIMTMPGLPR CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC APSAEKIFLNEAGYIEGLF CCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA