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The map label for this gene is yodM [H]

Identifier: 110634549

GI number: 110634549

Start: 2348980

End: 2349726

Strand: Reverse

Name: yodM [H]

Synonym: Meso_2200

Alternate gene names: 110634549

Gene position: 2349726-2348980 (Counterclockwise)

Preceding gene: 110634553

Following gene: 110634548

Centisome position: 53.25

GC content: 64.79

Gene sequence:

>747_bases
ATGAACCTGGTTACCGGAGGGATGGTCGAATGGGCGACCCGCATAGTCCGAGGCATGCAGCACCGGCCCGGATCGGTGCT
GCCGGTCGCTGTCATCGGCATCATGGGGCTGGGCCTTTATGCCTTCCTGTCGCTCGCCGACGAAATGGCCGAGGGCGAGA
TCCGCGCCTGGGACGAGAGGCTCTTCCTCGCTTTCCGCAATCCGGCCGATCCCGCCAATCCGCTCGGTCCGCCCTGGCTG
GAGGAGGCGGCGCTGGAGGTGACCGCGCTCGGCGGCTACACCCTGATCATCCTCACCGTCGCCGCCGTGGTGGGACTGCT
CCTCGTCACGCGACGCCATGGCCCGGCTCTTTACACGATCCTGTCGGTCGGAACAGGCTCGCTTGCCTCGTTCCTCTCCA
AACAGTTCTACGACCGGGCGAGGCCGGATCTCGTCCCGCAGCTCGACATAGTGCATACGGCGAGCTTCCCGAGCGGACAT
GCGATGGTGACCACCGTCGCTTATCTCACGCTCGCGGCCCTTGTTATCCGCTTCGTTCACGACCTGCGCGTGAGAATCTA
CGTGGCTGGGGTGGCGGTCTTCGTCTCCTTGATTGTGGGTGTAAGCCGCGTCTATCTCGGGGTCCATTGGCCAAGCGATG
TTGCCGCCGGATGGGCGCTCGGGGTTGCGTGGGCAAGCCTCGTCTGGCTTCTCGTGGCCGTTCTGCAGTTCCTGCGCAGG
AAGCGCACGGTTCGGTCGGAAGAGTGA

Upstream 100 bases:

>100_bases
GCCATGTTGCCGCGCCCCTGCCGGAATGGATGAGAAATACATATTAAAGACATTTGGAACGACGACGTTATTTTCAAGCC
GCTGAAATGATGGAGGCTCA

Downstream 100 bases:

>100_bases
GGAAACAGTTGCGCGAATGCCGGTTCGCCGCTATGGAAATGCTATGAGCATGGTTCTAAACGCAAAGCTTTGGTGGTGGG
CCCGCTAACGAGCGGCCGGC

Product: phosphoesterase, PA-phosphatase related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNLVTGGMVEWATRIVRGMQHRPGSVLPVAVIGIMGLGLYAFLSLADEMAEGEIRAWDERLFLAFRNPADPANPLGPPWL
EEAALEVTALGGYTLIILTVAAVVGLLLVTRRHGPALYTILSVGTGSLASFLSKQFYDRARPDLVPQLDIVHTASFPSGH
AMVTTVAYLTLAALVIRFVHDLRVRIYVAGVAVFVSLIVGVSRVYLGVHWPSDVAAGWALGVAWASLVWLLVAVLQFLRR
KRTVRSEE

Sequences:

>Translated_248_residues
MNLVTGGMVEWATRIVRGMQHRPGSVLPVAVIGIMGLGLYAFLSLADEMAEGEIRAWDERLFLAFRNPADPANPLGPPWL
EEAALEVTALGGYTLIILTVAAVVGLLLVTRRHGPALYTILSVGTGSLASFLSKQFYDRARPDLVPQLDIVHTASFPSGH
AMVTTVAYLTLAALVIRFVHDLRVRIYVAGVAVFVSLIVGVSRVYLGVHWPSDVAAGWALGVAWASLVWLLVAVLQFLRR
KRTVRSEE
>Mature_248_residues
MNLVTGGMVEWATRIVRGMQHRPGSVLPVAVIGIMGLGLYAFLSLADEMAEGEIRAWDERLFLAFRNPADPANPLGPPWL
EEAALEVTALGGYTLIILTVAAVVGLLLVTRRHGPALYTILSVGTGSLASFLSKQFYDRARPDLVPQLDIVHTASFPSGH
AMVTTVAYLTLAALVIRFVHDLRVRIYVAGVAVFVSLIVGVSRVYLGVHWPSDVAAGWALGVAWASLVWLLVAVLQFLRR
KRTVRSEE

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 26952; Mature: 26952

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVTGGMVEWATRIVRGMQHRPGSVLPVAVIGIMGLGLYAFLSLADEMAEGEIRAWDER
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LFLAFRNPADPANPLGPPWLEEAALEVTALGGYTLIILTVAAVVGLLLVTRRHGPALYTI
HEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LSVGTGSLASFLSKQFYDRARPDLVPQLDIVHTASFPSGHAMVTTVAYLTLAALVIRFVH
HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
DLRVRIYVAGVAVFVSLIVGVSRVYLGVHWPSDVAAGWALGVAWASLVWLLVAVLQFLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRTVRSEE
HHCCCCCC
>Mature Secondary Structure
MNLVTGGMVEWATRIVRGMQHRPGSVLPVAVIGIMGLGLYAFLSLADEMAEGEIRAWDER
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LFLAFRNPADPANPLGPPWLEEAALEVTALGGYTLIILTVAAVVGLLLVTRRHGPALYTI
HEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LSVGTGSLASFLSKQFYDRARPDLVPQLDIVHTASFPSGHAMVTTVAYLTLAALVIRFVH
HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
DLRVRIYVAGVAVFVSLIVGVSRVYLGVHWPSDVAAGWALGVAWASLVWLLVAVLQFLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRTVRSEE
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]