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The map label for this gene is yvaP [H]

Identifier: 110634441

GI number: 110634441

Start: 2244244

End: 2244894

Strand: Direct

Name: yvaP [H]

Synonym: Meso_2092

Alternate gene names: 110634441

Gene position: 2244244-2244894 (Clockwise)

Preceding gene: 110634437

Following gene: 110634442

Centisome position: 50.86

GC content: 62.52

Gene sequence:

>651_bases
ATGGCCTCGGAAATTCTATGCTCGCGATGGACGACACTCATCATCCGCGAACTTATGTGCGGCACCACGCGCTTCAACGA
TTTACGCCGCGGCGTGCCGCGCATGTCGCCCGCGCTTTTATCCAAGCGCCTCAAAGAGTTGGAGCGGGCCGGGATCGTCC
GCACGGCGCCGAGCCAGGCCGGCCCGATGGAATACCGGCTCACAGAGGCCGGAGAGGATTTGCGCCCGATCATCCTTGGC
ATCGGCTTCTGGGGCCAGCGCTGGGTGGAATCGCAGCTGACGCTCAAGAATCTAGACCCGTCTCTTCTCATGTGGGACAT
GCGGCGCAATCTCAATCCCAAGCCGCTGCCGCCGAAACGCTGTACGATTCAATTTCAGTACCCGGAGCTTCCGCCTTCGC
GGCGGAACTGGTGGCTGGTGGTCGACGCGGGCAATGTGGATCTCTGCGGTTTCGATCCGGGTTTCGAGGTCGACCTGCTC
GTGACGGGTTCCTTGCGCAGCATGACGGCTGTCTGGATGGGCCTGAGCATCGTTCGCAAGGAGGTCGAGGCAGGCAGGCT
CGAACTCATCGGCGACCCACAAATCGCGCGCGCCATGCAGCAATGGCTGGGACTTAGCACCTTCGCGCCGGAAACCCGGC
GGGTGCAGTAG

Upstream 100 bases:

>100_bases
CATTCCAGCGCTGCTTCTTTTGCGGTATTCTCTGCCGTTGGCGCCAAGGGTGACCGCAACGCAGGATCGTGGGAGTTACG
GGCAGTTCTGTCCGGTGGCG

Downstream 100 bases:

>100_bases
CCCGCCTACCCTGTCGTTCCGTCGGTCCGGCTTGCATCGCGGCCTGGATCGATTACTTTTCGATGCCATGTTGCCGCATC
CGGCCGTTGAGGAGATCAAT

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MASEILCSRWTTLIIRELMCGTTRFNDLRRGVPRMSPALLSKRLKELERAGIVRTAPSQAGPMEYRLTEAGEDLRPIILG
IGFWGQRWVESQLTLKNLDPSLLMWDMRRNLNPKPLPPKRCTIQFQYPELPPSRRNWWLVVDAGNVDLCGFDPGFEVDLL
VTGSLRSMTAVWMGLSIVRKEVEAGRLELIGDPQIARAMQQWLGLSTFAPETRRVQ

Sequences:

>Translated_216_residues
MASEILCSRWTTLIIRELMCGTTRFNDLRRGVPRMSPALLSKRLKELERAGIVRTAPSQAGPMEYRLTEAGEDLRPIILG
IGFWGQRWVESQLTLKNLDPSLLMWDMRRNLNPKPLPPKRCTIQFQYPELPPSRRNWWLVVDAGNVDLCGFDPGFEVDLL
VTGSLRSMTAVWMGLSIVRKEVEAGRLELIGDPQIARAMQQWLGLSTFAPETRRVQ
>Mature_215_residues
ASEILCSRWTTLIIRELMCGTTRFNDLRRGVPRMSPALLSKRLKELERAGIVRTAPSQAGPMEYRLTEAGEDLRPIILGI
GFWGQRWVESQLTLKNLDPSLLMWDMRRNLNPKPLPPKRCTIQFQYPELPPSRRNWWLVVDAGNVDLCGFDPGFEVDLLV
TGSLRSMTAVWMGLSIVRKEVEAGRLELIGDPQIARAMQQWLGLSTFAPETRRVQ

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 24647; Mature: 24516

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEILCSRWTTLIIRELMCGTTRFNDLRRGVPRMSPALLSKRLKELERAGIVRTAPSQA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCC
GPMEYRLTEAGEDLRPIILGIGFWGQRWVESQLTLKNLDPSLLMWDMRRNLNPKPLPPKR
CCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
CTIQFQYPELPPSRRNWWLVVDAGNVDLCGFDPGFEVDLLVTGSLRSMTAVWMGLSIVRK
EEEEEECCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
EVEAGRLELIGDPQIARAMQQWLGLSTFAPETRRVQ
HHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ASEILCSRWTTLIIRELMCGTTRFNDLRRGVPRMSPALLSKRLKELERAGIVRTAPSQA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCC
GPMEYRLTEAGEDLRPIILGIGFWGQRWVESQLTLKNLDPSLLMWDMRRNLNPKPLPPKR
CCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
CTIQFQYPELPPSRRNWWLVVDAGNVDLCGFDPGFEVDLLVTGSLRSMTAVWMGLSIVRK
EEEEEECCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
EVEAGRLELIGDPQIARAMQQWLGLSTFAPETRRVQ
HHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]