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The map label for this gene is yczG [H]

Identifier: 110634442

GI number: 110634442

Start: 2244962

End: 2245300

Strand: Direct

Name: yczG [H]

Synonym: Meso_2093

Alternate gene names: 110634442

Gene position: 2244962-2245300 (Clockwise)

Preceding gene: 110634441

Following gene: 110634443

Centisome position: 50.88

GC content: 62.54

Gene sequence:

>339_bases
ATGTTGCCGCATCCGGCCGTTGAGGAGATCAATCTAGCCACCGTTCTCGCTGCTTTGGGCGACCCCACGCGGCTAGCCAT
CCTGGGCGATCTTGCCCGGCAGGACGGCAAGGCGCTGACCTGCTCCCATCTTACCGACCTCACCTCCAAATCGAATCTCA
CCTACCATCTCGCCAAGATGCGGGAAGCCGGCATCGTGCGGGTTGAACCGCGTGGCACGTCACGGCTGATCACCATCAGA
CGCGCCGATCTCAACGCGCGCTTTCCCGGCCTCCTTGACTCGATCATCGCCACGGCGGTCGGCCTGCCCCCGATGAAAAG
ACGGGCAACCGCGAAATAA

Upstream 100 bases:

>100_bases
ACCTTCGCGCCGGAAACCCGGCGGGTGCAGTAGCCCGCCTACCCTGTCGTTCCGTCGGTCCGGCTTGCATCGCGGCCTGG
ATCGATTACTTTTCGATGCC

Downstream 100 bases:

>100_bases
GCGTGGGTCCCTCCCCAAATCGATTCAAGTTTAATTAATTTTTACAATCCCCGGACTATGCGGCGGCAATCTATTGCAGT
CTTCGGAGTCCATTTTGTCG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MLPHPAVEEINLATVLAALGDPTRLAILGDLARQDGKALTCSHLTDLTSKSNLTYHLAKMREAGIVRVEPRGTSRLITIR
RADLNARFPGLLDSIIATAVGLPPMKRRATAK

Sequences:

>Translated_112_residues
MLPHPAVEEINLATVLAALGDPTRLAILGDLARQDGKALTCSHLTDLTSKSNLTYHLAKMREAGIVRVEPRGTSRLITIR
RADLNARFPGLLDSIIATAVGLPPMKRRATAK
>Mature_112_residues
MLPHPAVEEINLATVLAALGDPTRLAILGDLARQDGKALTCSHLTDLTSKSNLTYHLAKMREAGIVRVEPRGTSRLITIR
RADLNARFPGLLDSIIATAVGLPPMKRRATAK

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12076; Mature: 12076

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPHPAVEEINLATVLAALGDPTRLAILGDLARQDGKALTCSHLTDLTSKSNLTYHLAKM
CCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCEEEHHHHHHCCCCCCCCHHEEHH
REAGIVRVEPRGTSRLITIRRADLNARFPGLLDSIIATAVGLPPMKRRATAK
HHCCEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLPHPAVEEINLATVLAALGDPTRLAILGDLARQDGKALTCSHLTDLTSKSNLTYHLAKM
CCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCEEEHHHHHHCCCCCCCCHHEEHH
REAGIVRVEPRGTSRLITIRRADLNARFPGLLDSIIATAVGLPPMKRRATAK
HHCCEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]