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The map label for this gene is yafE [H]

Identifier: 110634437

GI number: 110634437

Start: 2241158

End: 2241934

Strand: Direct

Name: yafE [H]

Synonym: Meso_2088

Alternate gene names: 110634437

Gene position: 2241158-2241934 (Clockwise)

Preceding gene: 110634433

Following gene: 110634441

Centisome position: 50.79

GC content: 66.8

Gene sequence:

>777_bases
ATGTCCGGTGACAAGAGCCATGAAGCCTTGGTGGGCGGCCAATTCGGCTCGCGTGCTGAAGCCTATCTGAAAAGCGCCGT
CCATGCGCAGGGCGAGGACCTGCAGTCGCTGGTCGCCAGGATGGCCGGCAAAAGCGGCGCCCGCGTGCTGGATCTCGGCT
GCGGCGGCGGTCACGTCACCTTCCACATCGCCCCGCTGGTGCGCGAGGTGGTCGCCTACGACCTGTCGCCGGAGATGCTG
GAGGTGGTGGGCCGCACCGCCCGCGAGCGCGGGCTGGCCAACATAGCCACCGCGCGCGGCGTGGCCGAGAGCCTTCCTTT
CGAGGCCGACAGCTTCGATGCAGTGCTGAGCCGCTTCAGCGCCCATCACTGGCGCGATCTCGATGCAGGCCTGCGTGAGG
CAGCGCGCGTCCTGAAGCCCGGCGGAAGCGTCATCATCCTCGATACTGTGACCGCTGGCGTCCCGATCATCGACACCTTC
TTCCAGGCGATCGAGCTTCTGCGCGACTGTTCCCATGTGCGCAATTATTCGCGCGCCGAATGGGAGGCCGCCCTTGCCCG
CGCCGGCCTGCCGGTCCGATCCTCCAGCCGTTTCCGGCTGCGGCTCGAATTCAAGTCGTGGGTCGAGCGCATGAACACGC
CGAAAATCCAGGTGGAGGCCATCCGCGCCCTGCAGACCTCGGTCTCCGAGATCGCGACGCGCCACTACGAAACGGAGCCG
GACGGGAGCCACACGATCGACGTGGCGTTGTTCGAGGCGGTCAAGCCCATCGCTTGA

Upstream 100 bases:

>100_bases
GTCATCATGGTAGCGGCTTATACCAGTATAATTTTGCATCTGAAACTGGTGTGAATCTGCTGCTATGACTGAAGCGACAT
CAAACAGCGGAGAAGAAATC

Downstream 100 bases:

>100_bases
GACGCCGCACTCTTCCTACTGCGTCCGCCGCTCCGCAATTAGCGCGAGTTGCTCCGTAACCGTGCCCCAGCCGTCATAGA
AACCCAGCTCTTCATGCATA

Product: methyltransferase type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSGDKSHEALVGGQFGSRAEAYLKSAVHAQGEDLQSLVARMAGKSGARVLDLGCGGGHVTFHIAPLVREVVAYDLSPEML
EVVGRTARERGLANIATARGVAESLPFEADSFDAVLSRFSAHHWRDLDAGLREAARVLKPGGSVIILDTVTAGVPIIDTF
FQAIELLRDCSHVRNYSRAEWEAALARAGLPVRSSSRFRLRLEFKSWVERMNTPKIQVEAIRALQTSVSEIATRHYETEP
DGSHTIDVALFEAVKPIA

Sequences:

>Translated_258_residues
MSGDKSHEALVGGQFGSRAEAYLKSAVHAQGEDLQSLVARMAGKSGARVLDLGCGGGHVTFHIAPLVREVVAYDLSPEML
EVVGRTARERGLANIATARGVAESLPFEADSFDAVLSRFSAHHWRDLDAGLREAARVLKPGGSVIILDTVTAGVPIIDTF
FQAIELLRDCSHVRNYSRAEWEAALARAGLPVRSSSRFRLRLEFKSWVERMNTPKIQVEAIRALQTSVSEIATRHYETEP
DGSHTIDVALFEAVKPIA
>Mature_257_residues
SGDKSHEALVGGQFGSRAEAYLKSAVHAQGEDLQSLVARMAGKSGARVLDLGCGGGHVTFHIAPLVREVVAYDLSPEMLE
VVGRTARERGLANIATARGVAESLPFEADSFDAVLSRFSAHHWRDLDAGLREAARVLKPGGSVIILDTVTAGVPIIDTFF
QAIELLRDCSHVRNYSRAEWEAALARAGLPVRSSSRFRLRLEFKSWVERMNTPKIQVEAIRALQTSVSEIATRHYETEPD
GSHTIDVALFEAVKPIA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=203, Percent_Identity=47.2906403940887, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1786994, Length=143, Percent_Identity=32.8671328671329, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI48994983, Length=126, Percent_Identity=34.1269841269841, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28072; Mature: 27941

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDKSHEALVGGQFGSRAEAYLKSAVHAQGEDLQSLVARMAGKSGARVLDLGCGGGHVT
CCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEE
FHIAPLVREVVAYDLSPEMLEVVGRTARERGLANIATARGVAESLPFEADSFDAVLSRFS
EEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AHHWRDLDAGLREAARVLKPGGSVIILDTVTAGVPIIDTFFQAIELLRDCSHVRNYSRAE
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
WEAALARAGLPVRSSSRFRLRLEFKSWVERMNTPKIQVEAIRALQTSVSEIATRHYETEP
HHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
DGSHTIDVALFEAVKPIA
CCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SGDKSHEALVGGQFGSRAEAYLKSAVHAQGEDLQSLVARMAGKSGARVLDLGCGGGHVT
CCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEE
FHIAPLVREVVAYDLSPEMLEVVGRTARERGLANIATARGVAESLPFEADSFDAVLSRFS
EEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AHHWRDLDAGLREAARVLKPGGSVIILDTVTAGVPIIDTFFQAIELLRDCSHVRNYSRAE
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
WEAALARAGLPVRSSSRFRLRLEFKSWVERMNTPKIQVEAIRALQTSVSEIATRHYETEP
HHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
DGSHTIDVALFEAVKPIA
CCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]