| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is murB
Identifier: 110634355
GI number: 110634355
Start: 2151446
End: 2152411
Strand: Reverse
Name: murB
Synonym: Meso_2005
Alternate gene names: 110634355
Gene position: 2152411-2151446 (Counterclockwise)
Preceding gene: 110634356
Following gene: 110634354
Centisome position: 48.78
GC content: 62.01
Gene sequence:
>966_bases GTGACCCGCGGCTCCGTACTCCTTGAAAAGCTCGGCGACCGGCTATCCGGCCTGCGCGGGCGGCTCACGCCGGATGCCGG CATGGACAAGATCACCTGGTTCCGCGCGGGTGGAGAGGCGGACCTGCTTTTCCAGCCGCAGGATGAGGAGGATCTCGCGG CCTTTCTTAAAGCGGTGCCTGAAGAAATCCCGGTGACGATTGTCGGCATTGGCTCCAATCTTCTGGTTCGCGACGACGGC ATGCGCGGTTTCGTCGTGCGGCTTTCAGCCAAGGGCTTTGGTGAAGCCGAGGTGATTTCGCCCACCCGTATCCGAGCAGG CGCGGCGATACCGGACAAGCGGCTTGCCGCCTTCGCGCTCGAAGCAGGCATCGGCGGCTTCCATTTTTTCCATGGCATTC CCGGAGGTTTGGGCGGTGCGCTGCGCATGAATGCCGGCGCGAATGGCGTGGAGACGAGCGAACGTGTCGTGGAGGTGCGC GCGCTCGACCGTCGGGGCGAGCTGCACGTGTTTTCCAATGCCGAGATGGGGTATTCCTACCGCGCATCGGCGGCATCGCA GGGGCTTATCTTCACATCGGCTGTGCTTGAAGGCTACGCGGAGGATCGCGAGGCCATCCGGGCTGCCATGGATGCCGTTC AGCATCATCGCGAAACGGTCCAGCCCATCCGGGAGAAGACAGGAGGCTCGACCTTCAAAAACCCGGAGGGCACCTCCGCC TGGAAGGAGATCGACAGGGCCGGCTGCCGCGGCCTGATGATTGGCGGCGCCCAAATGTCGCCCATGCATTGCAATTTCAT GATCAATACCGGCACGGCAACCGGCTACGATCTCGAATATCTGGGCGAAACGGTTCGCGCACGCGTTTTGGAGAATTCCG GCATAAAGCTGGAGTGGGAGATCAAGCGTATCGGCGCCTTTAAGCCGGACCATTCGGTCGATCCGTTCCTCGGCCAATTG CTTTAG
Upstream 100 bases:
>100_bases CCATCGTGCGCGAGGCGGCCAATGAAGGCGATTTCGTCGTCTTTCTCGGCGCGGGCAATATCACTCAATGGGCCTATGCC CTGCCCAAGGAACTCTGTTC
Downstream 100 bases:
>100_bases TTTCTCAGGGGTGTGCTGTCGGCACTTGAATGCCGATCCGCATGTTCACCGTTCAGGAGCACCGGGGCTCTCGTTGCGCG GAGGCTATGGCTGCGTCTGC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTRGSVLLEKLGDRLSGLRGRLTPDAGMDKITWFRAGGEADLLFQPQDEEDLAAFLKAVPEEIPVTIVGIGSNLLVRDDG MRGFVVRLSAKGFGEAEVISPTRIRAGAAIPDKRLAAFALEAGIGGFHFFHGIPGGLGGALRMNAGANGVETSERVVEVR ALDRRGELHVFSNAEMGYSYRASAASQGLIFTSAVLEGYAEDREAIRAAMDAVQHHRETVQPIREKTGGSTFKNPEGTSA WKEIDRAGCRGLMIGGAQMSPMHCNFMINTGTATGYDLEYLGETVRARVLENSGIKLEWEIKRIGAFKPDHSVDPFLGQL L
Sequences:
>Translated_321_residues MTRGSVLLEKLGDRLSGLRGRLTPDAGMDKITWFRAGGEADLLFQPQDEEDLAAFLKAVPEEIPVTIVGIGSNLLVRDDG MRGFVVRLSAKGFGEAEVISPTRIRAGAAIPDKRLAAFALEAGIGGFHFFHGIPGGLGGALRMNAGANGVETSERVVEVR ALDRRGELHVFSNAEMGYSYRASAASQGLIFTSAVLEGYAEDREAIRAAMDAVQHHRETVQPIREKTGGSTFKNPEGTSA WKEIDRAGCRGLMIGGAQMSPMHCNFMINTGTATGYDLEYLGETVRARVLENSGIKLEWEIKRIGAFKPDHSVDPFLGQL L >Mature_320_residues TRGSVLLEKLGDRLSGLRGRLTPDAGMDKITWFRAGGEADLLFQPQDEEDLAAFLKAVPEEIPVTIVGIGSNLLVRDDGM RGFVVRLSAKGFGEAEVISPTRIRAGAAIPDKRLAAFALEAGIGGFHFFHGIPGGLGGALRMNAGANGVETSERVVEVRA LDRRGELHVFSNAEMGYSYRASAASQGLIFTSAVLEGYAEDREAIRAAMDAVQHHRETVQPIREKTGGSTFKNPEGTSAW KEIDRAGCRGLMIGGAQMSPMHCNFMINTGTATGYDLEYLGETVRARVLENSGIKLEWEIKRIGAFKPDHSVDPFLGQLL
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_MESSB (Q11GS7)
Other databases:
- EMBL: CP000390 - RefSeq: YP_674563.1 - ProteinModelPortal: Q11GS7 - SMR: Q11GS7 - STRING: Q11GS7 - GeneID: 4182798 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_2005 - NMPDR: fig|266779.1.peg.600 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: SKKHAGF - PhylomeDB: Q11GS7 - ProtClustDB: PRK13905 - BioCyc: MSP266779:MESO_2005-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 34662; Mature: 34531
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 181-181 ACT_SITE 230-230 ACT_SITE 300-300
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGSVLLEKLGDRLSGLRGRLTPDAGMDKITWFRAGGEADLLFQPQDEEDLAAFLKAVP CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCC EEIPVTIVGIGSNLLVRDDGMRGFVVRLSAKGFGEAEVISPTRIRAGAAIPDKRLAAFAL HHCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCCEECCCCCEECCCCCCHHHHHHHHH EAGIGGFHFFHGIPGGLGGALRMNAGANGVETSERVVEVRALDRRGELHVFSNAEMGYSY HHCCCHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEE RASAASQGLIFTSAVLEGYAEDREAIRAAMDAVQHHRETVQPIREKTGGSTFKNPEGTSA ECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH WKEIDRAGCRGLMIGGAQMSPMHCNFMINTGTATGYDLEYLGETVRARVLENSGIKLEWE HHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE IKRIGAFKPDHSVDPFLGQLL EEEECCCCCCCCCCHHHHHCC >Mature Secondary Structure TRGSVLLEKLGDRLSGLRGRLTPDAGMDKITWFRAGGEADLLFQPQDEEDLAAFLKAVP CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCC EEIPVTIVGIGSNLLVRDDGMRGFVVRLSAKGFGEAEVISPTRIRAGAAIPDKRLAAFAL HHCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCCEECCCCCEECCCCCCHHHHHHHHH EAGIGGFHFFHGIPGGLGGALRMNAGANGVETSERVVEVRALDRRGELHVFSNAEMGYSY HHCCCHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEE RASAASQGLIFTSAVLEGYAEDREAIRAAMDAVQHHRETVQPIREKTGGSTFKNPEGTSA ECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH WKEIDRAGCRGLMIGGAQMSPMHCNFMINTGTATGYDLEYLGETVRARVLENSGIKLEWE HHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE IKRIGAFKPDHSVDPFLGQLL EEEECCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA