| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634196
Identifier: 110634196
GI number: 110634196
Start: 1982612
End: 1983577
Strand: Reverse
Name: 110634196
Synonym: Meso_1846
Alternate gene names: NA
Gene position: 1983577-1982612 (Counterclockwise)
Preceding gene: 110634197
Following gene: 110634195
Centisome position: 44.95
GC content: 62.63
Gene sequence:
>966_bases ATGAACACATCCATTCTCAACCGGCTGCGGCGCTGCTTTTCGCTGTTGTTCATATCGGCGCTGGCCGGCCTTTCCGTGTT GCCGGCCCAAGCGGCCTGGCCGGAGCGCGCGATCGAAATCATCGTCGCCTACGCTCCGGGCGGCGGGTCGGACGCGATCG CGCGCATCGCCGCGCGCATCATGTCGCGCGAACTGGGCGTGCCGGTGAACGTCGTCAACATGCCGGGCGGCAACCAGCTG CCGGGGATCGAGGCGGTGATGCGGGCAGCGCCCGACGGCTATACTCTTCTTCTGGAAACACCCGCGACGAGCTCGATCAA GGCGACCATACCCGACAACCCGGTCGATCTGCAGGCGCGCACCTATGGCCCTCTCATGGCCGCCCAGGGCGCGCTCATCA TGGTCAAGGGCGATTCCCCCTGGAACAGCGTCAGCGACATGGTCGACTTCATCAAGAACAATCCCGGAAGCTTCACTTAT GTCCGGCTTGGTGGATCCACCTATTCCGATCTCGTAACCCAAGGACTTTTCTCCGTGGCGGGCATCGATCCCCAGACGGT GAAGCCGGTCGACTACAGTGGGAATGGTCCCGGCAACATTGCGGTCGCGGGCGGTCACGTGATGATGTCCGGCGGCTCGA TCAATCCGCTGATCTCATCGGGCGATCTCAAGGTGCTGGCGATCGCCGGTCCTGAAAGAGCCACCGCGCTTCCCGATGTT CCGACCCTCGCCGAGTCGGGCTATCCGGTCGATTTCGTCGCTTATTTCGGATTCTCGGGACCGGTCGGTCTGCCTGAAGA GGTGCTGAACCGGCTCGATGAGGTCGTCCAGAAGATGAGCGGGGACGACAGTTTCCGCAAGGAGATCGAAGCGATCGGCT TCTATCCGCGTTTCCTGCCGGCGAAAGAGGCGCGCACCTATATCCTCGATGAGGCGGAGGAATATCGCGCGCTGGCGAAG CGATGA
Upstream 100 bases:
>100_bases TGCGCGTCTACAGCGCAGTGTGGAAGGACTAGAGGGGAAGGCAGGGTGAACCTGACCGTCACAAAAACCGACAAGGGGAA TTCGTGAGGAGAACAATGCG
Downstream 100 bases:
>100_bases ACGAGTCAGGAGGGCAGGCGGATCGCTGCGGCCGCCCCCCTGCATCCGTCGATCCCAACTTGCGGAGCAACCGCGATGTC CGATGAGCAGACCGTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARIMSRELGVPVNVVNMPGGNQL PGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQARTYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTY VRLGGSTYSDLVTQGLFSVAGIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLPAKEARTYILDEAEEYRALAK R
Sequences:
>Translated_321_residues MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARIMSRELGVPVNVVNMPGGNQL PGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQARTYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTY VRLGGSTYSDLVTQGLFSVAGIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLPAKEARTYILDEAEEYRALAK R >Mature_321_residues MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARIMSRELGVPVNVVNMPGGNQL PGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQARTYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTY VRLGGSTYSDLVTQGLFSVAGIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLPAKEARTYILDEAEEYRALAK R
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34020; Mature: 34020
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH MSRELGVPVNVVNMPGGNQLPGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQAR HHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCEEEEC TYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTYVRLGGSTYSDLVTQGLFSVA CCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHC GIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV CCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCEECCCCEEEEEEECCCCCCCCCCC PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLP CHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC AKEARTYILDEAEEYRALAKR HHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH MSRELGVPVNVVNMPGGNQLPGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQAR HHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCEEEEC TYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTYVRLGGSTYSDLVTQGLFSVA CCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHC GIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV CCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCEECCCCEEEEEEECCCCCCCCCCC PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLP CHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC AKEARTYILDEAEEYRALAKR HHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]