| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634194
Identifier: 110634194
GI number: 110634194
Start: 1980590
End: 1982047
Strand: Reverse
Name: 110634194
Synonym: Meso_1844
Alternate gene names: NA
Gene position: 1982047-1980590 (Counterclockwise)
Preceding gene: 110634195
Following gene: 110634193
Centisome position: 44.92
GC content: 63.85
Gene sequence:
>1458_bases ATGGACGCCTTTCTAGCCGGTATCCTCGCCGCCTGTTCTCCCCAGAACCTGGCGTTTGCCTTCATGGGATGCCTGATCGG GACGATCGTCGGCGTTCTGCCCGGCATCGGAGCCGTTTCCGCGGTTGCCATTCTCTTCCCGTTCACGGTCTATCTGCCGC CGGAGGGGATGATCATCGCGTTAATCTCCATCTACTACGGCTCGATGTATGGCGGGTCGACGACTGCGATCCTGATGAAG GTTCCCGGAGAGGTTTCCTCCATCGTCACCGCTATCGATGGTTATGAGATGACGAAGCAGGGGAGGGCGGGGCCGGCACT TGCAATAGCCGCGATCGCTTCCTTCCTCGCCGGTATCATCGGCACGATCCTGGTAGCGACGCTCGGCCCTTCCACGGCGC GCCTGGCGCTCGGTTTCGGCCCGGCGGAGTATCTGGGGCTCAGCATATTCAGCCTGACCGCGATCGCCGCCCTTTCAGGA CGCTCGCTGCTTCGCGGCGCCATCATCGCCGTGGTCGGCCTGATCCTCGTTTCGGTGGGCTATGACGAGGCCGCCGGGCT GGCGCGCCTGACCTTCGGCACGACCGCGCTGCAGCAAGGCTTCAATATCGTGCCCGTGATGATCGGCCTCTTCGGCCTGG GCGAGATGCTGCGCATCTATGAGGAGGAGACCGGACATTTCAGCAAGGTCAGGATCGAAAAGCTCATGCCCAGCCGGGAG GAATGCGCCCTCGGGCTGGCTGCAGGGGCGCGGGCGACAGCCCTGTCGTTTCCTCTCGGCCTGCTGCCGGGCATGCTGCC TTCGGTTCTGTCCTTCCTCGCCTATACTCTCGAAAAGCACTTTTCCAAGACGCCGGAAAAGTTCGGCAAGGGCGCGGTGG CCGGCGTTGCGGCGGCCGAGGCCTCGAACAATGCGGCGGCGATGGGCAATCTGCTGCCGCTGATGGCGCTGGGCGTCCCC ACCGGACCCACCATGGCGCTGATCCTGGGCGCCCTGACCGTCTATGGCCTCGCGCCGGGGCCGATGCTGTTCATAGCGCA AGCCGATTTTGTGTGGACCGTCATCGGCAGCTTCTTCGTTGCCAATGTGATCCTCCTCGTCCTCAATCTTCCCCTCGTGG GCGTCTGGGTCCGCATCGCCGCGATTCCCAAGGCGATCCTCACGCCGGCGGTGATGGTCCTTTGCCTGGTGGGCGCTTTC AGCGTGCGCAACAGCATGTTCGATCTCTGGGTGTGCGTCGTCTTTGGCTTCCTGGGCTGGTTGCTGACGCGGGCCAAATG GCCGCTGGCGCCTTTGGTGCTGGCCTATGTGCTGGGACCGATGCTCGAGAGCTCGGCCCGCCAGGTCATCGAGCTCTCCC CCCTCGTGCTTTTGGAGCGGCCGCTCTTCTGGATGTTCATCGTCCTTGCGGCGCTCTCGCTCTGGTTCAGCCGCCGCCTC TGGCGCGCTATCGAATAA
Upstream 100 bases:
>100_bases CTTTGCAACCGCCTCCGCCTGGCTCTGGACCACGCTGATGATCAGCCTCCCACGCGGCTATTTTTCCACCTGGATTTTTT GGTAGGGAACGGAGCCGCAC
Downstream 100 bases:
>100_bases GGTCGGACGGAAATGCAAAATGGGAAAAAACAGAACGTAGCTGTCGTGGGAGCGGGCATTGTGGGCGTATGCAGCGCCCT CTGGCTGCAAAGGGAAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MDAFLAGILAACSPQNLAFAFMGCLIGTIVGVLPGIGAVSAVAILFPFTVYLPPEGMIIALISIYYGSMYGGSTTAILMK VPGEVSSIVTAIDGYEMTKQGRAGPALAIAAIASFLAGIIGTILVATLGPSTARLALGFGPAEYLGLSIFSLTAIAALSG RSLLRGAIIAVVGLILVSVGYDEAAGLARLTFGTTALQQGFNIVPVMIGLFGLGEMLRIYEEETGHFSKVRIEKLMPSRE ECALGLAAGARATALSFPLGLLPGMLPSVLSFLAYTLEKHFSKTPEKFGKGAVAGVAAAEASNNAAAMGNLLPLMALGVP TGPTMALILGALTVYGLAPGPMLFIAQADFVWTVIGSFFVANVILLVLNLPLVGVWVRIAAIPKAILTPAVMVLCLVGAF SVRNSMFDLWVCVVFGFLGWLLTRAKWPLAPLVLAYVLGPMLESSARQVIELSPLVLLERPLFWMFIVLAALSLWFSRRL WRAIE
Sequences:
>Translated_485_residues MDAFLAGILAACSPQNLAFAFMGCLIGTIVGVLPGIGAVSAVAILFPFTVYLPPEGMIIALISIYYGSMYGGSTTAILMK VPGEVSSIVTAIDGYEMTKQGRAGPALAIAAIASFLAGIIGTILVATLGPSTARLALGFGPAEYLGLSIFSLTAIAALSG RSLLRGAIIAVVGLILVSVGYDEAAGLARLTFGTTALQQGFNIVPVMIGLFGLGEMLRIYEEETGHFSKVRIEKLMPSRE ECALGLAAGARATALSFPLGLLPGMLPSVLSFLAYTLEKHFSKTPEKFGKGAVAGVAAAEASNNAAAMGNLLPLMALGVP TGPTMALILGALTVYGLAPGPMLFIAQADFVWTVIGSFFVANVILLVLNLPLVGVWVRIAAIPKAILTPAVMVLCLVGAF SVRNSMFDLWVCVVFGFLGWLLTRAKWPLAPLVLAYVLGPMLESSARQVIELSPLVLLERPLFWMFIVLAALSLWFSRRL WRAIE >Mature_485_residues MDAFLAGILAACSPQNLAFAFMGCLIGTIVGVLPGIGAVSAVAILFPFTVYLPPEGMIIALISIYYGSMYGGSTTAILMK VPGEVSSIVTAIDGYEMTKQGRAGPALAIAAIASFLAGIIGTILVATLGPSTARLALGFGPAEYLGLSIFSLTAIAALSG RSLLRGAIIAVVGLILVSVGYDEAAGLARLTFGTTALQQGFNIVPVMIGLFGLGEMLRIYEEETGHFSKVRIEKLMPSRE ECALGLAAGARATALSFPLGLLPGMLPSVLSFLAYTLEKHFSKTPEKFGKGAVAGVAAAEASNNAAAMGNLLPLMALGVP TGPTMALILGALTVYGLAPGPMLFIAQADFVWTVIGSFFVANVILLVLNLPLVGVWVRIAAIPKAILTPAVMVLCLVGAF SVRNSMFDLWVCVVFGFLGWLLTRAKWPLAPLVLAYVLGPMLESSARQVIELSPLVLLERPLFWMFIVLAALSLWFSRRL WRAIE
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 50886; Mature: 50886
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAFLAGILAACSPQNLAFAFMGCLIGTIVGVLPGIGAVSAVAILFPFTVYLPPEGMIIA CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCHHHH LISIYYGSMYGGSTTAILMKVPGEVSSIVTAIDGYEMTKQGRAGPALAIAAIASFLAGII HHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHH GTILVATLGPSTARLALGFGPAEYLGLSIFSLTAIAALSGRSLLRGAIIAVVGLILVSVG HHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC YDEAAGLARLTFGTTALQQGFNIVPVMIGLFGLGEMLRIYEEETGHFSKVRIEKLMPSRE CCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH ECALGLAAGARATALSFPLGLLPGMLPSVLSFLAYTLEKHFSKTPEKFGKGAVAGVAAAE HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHC ASNNAAAMGNLLPLMALGVPTGPTMALILGALTVYGLAPGPMLFIAQADFVWTVIGSFFV CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHH ANVILLVLNLPLVGVWVRIAAIPKAILTPAVMVLCLVGAFSVRNSMFDLWVCVVFGFLGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTRAKWPLAPLVLAYVLGPMLESSARQVIELSPLVLLERPLFWMFIVLAALSLWFSRRL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH WRAIE HHHCC >Mature Secondary Structure MDAFLAGILAACSPQNLAFAFMGCLIGTIVGVLPGIGAVSAVAILFPFTVYLPPEGMIIA CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCHHHH LISIYYGSMYGGSTTAILMKVPGEVSSIVTAIDGYEMTKQGRAGPALAIAAIASFLAGII HHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHH GTILVATLGPSTARLALGFGPAEYLGLSIFSLTAIAALSGRSLLRGAIIAVVGLILVSVG HHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC YDEAAGLARLTFGTTALQQGFNIVPVMIGLFGLGEMLRIYEEETGHFSKVRIEKLMPSRE CCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH ECALGLAAGARATALSFPLGLLPGMLPSVLSFLAYTLEKHFSKTPEKFGKGAVAGVAAAE HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHC ASNNAAAMGNLLPLMALGVPTGPTMALILGALTVYGLAPGPMLFIAQADFVWTVIGSFFV CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHH ANVILLVLNLPLVGVWVRIAAIPKAILTPAVMVLCLVGAFSVRNSMFDLWVCVVFGFLGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTRAKWPLAPLVLAYVLGPMLESSARQVIELSPLVLLERPLFWMFIVLAALSLWFSRRL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH WRAIE HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]