| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634192
Identifier: 110634192
GI number: 110634192
Start: 1978416
End: 1979255
Strand: Reverse
Name: 110634192
Synonym: Meso_1842
Alternate gene names: NA
Gene position: 1979255-1978416 (Counterclockwise)
Preceding gene: 110634193
Following gene: 110634189
Centisome position: 44.86
GC content: 62.02
Gene sequence:
>840_bases ATGCGCATCTTTGATTGCCGCCTTAGACCTCCCTTCGGGGAGTTTCTTACCACCAGCTACTTCACCGACGTGCCGCGGAT CACGCGGATGGCAGCTGAAATGGGCCTGGAGGCGCCCGCGTCGCTTGCGGAAACCTCAATGGAACTACTGTTCACGGAGA TGGATGCGGCCGGCGTTGGAGTGGGGCTGGCAGCGGGCCGTATTTCGCCCGGTTTGGGGAACGTGAGCAACGCCAGCGTC CGTGAGCTTTGCCGGCTGTGGCCGGACAGGTTCGTGGGCCTTGCGGTGGTGGATCCTGGCAAGGCGGCCGAGGCATCGGC GGAGATTGACCGCGCCATGCGCGACGGCTTCAAAGGCGCACTCATCGAACCGGGATTGCTGGGAAACGCGCTGGCGATCG ACGACAGGCGCATCTACCCCTTCTATAGCCATTGCGAGGACGCAGGCATCCCGCTTTTCATCATGGCCGGAGGAAATGCG GGACCGGACCTGAGCTTCACAAATCCCGAGCACCTCGATCGTGTTGCGGCCGATTTCCCGCGTCTCAAGCTGGTGTCGTT GCATGGCAGCTGGCCATGGGTGCTGCAAATCCTGCATGTGTGCCTGCGCCGGCAAAACGTGTATCTGTGTCCAGACATGT ATCTGGCCGGCCGCATGCCGGGGTTCGAGGAATATGTCCGCGCTGCAAACGGCTTCCTCAGCGACCGGTTGCTCTTCGGC AGCTCCTATCCCGTGCTTGCGCTGGACCGAGCCGTCAAGAGCGTGCAGCAAATCGGTTTCCGTCCGGAGGTGCTCGAGCG CATTTTCTTCCGCAATGCCGCAGCATTGCTGGGGCTGTGA
Upstream 100 bases:
>100_bases CATCCATCGATATCGCGCCTTTCAGCCAATCGCGCTTCTGAGCCGCCTCGCTTTTTGCGGCGACTGCCACCACCTCCTGA TAAAGATCGGAACGTCTCGA
Downstream 100 bases:
>100_bases TGGCATCTTTCCGGTGGCTCAGCGTCCGCCGAGCGCTCCCGTCAATTCCTGCGCGACAGACGACACGAGCGGGCCAACCG CTTCGATGCGCTCGTCCGTC
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidase; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Hydrolase; Antibiotic-Resistance Protein; Amidohydrolase Family
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVGVGLAAGRISPGLGNVSNASV RELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGALIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNA GPDLSFTNPEHLDRVAADFPRLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL
Sequences:
>Translated_279_residues MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVGVGLAAGRISPGLGNVSNASV RELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGALIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNA GPDLSFTNPEHLDRVAADFPRLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL >Mature_279_residues MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVGVGLAAGRISPGLGNVSNASV RELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGALIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNA GPDLSFTNPEHLDRVAADFPRLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30626; Mature: 30626
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVG CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC VGLAAGRISPGLGNVSNASVRELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGA CHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCC LIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNAGPDLSFTNPEHLDRVAADFP CCCCCCCCCEEEECCCEECCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCC RLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG CEEEEEECCCCHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHHHHHHHHCCHHHHHHCCC SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVG CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC VGLAAGRISPGLGNVSNASVRELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGA CHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCC LIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNAGPDLSFTNPEHLDRVAADFP CCCCCCCCCEEEECCCEECCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCC RLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG CEEEEEECCCCHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHHHHHHHHCCHHHHHHCCC SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA