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The map label for this gene is yajC [H]

Identifier: 110634148

GI number: 110634148

Start: 1924064

End: 1924399

Strand: Reverse

Name: yajC [H]

Synonym: Meso_1797

Alternate gene names: 110634148

Gene position: 1924399-1924064 (Counterclockwise)

Preceding gene: 110634151

Following gene: 110634147

Centisome position: 43.61

GC content: 54.76

Gene sequence:

>336_bases
ATGTTTGTAACACCGGCATATGCTCAAGCGGCGGCGGGAGCACCGGATATGCTGATCAGCATTCTGCCTTTTGTGCTGAT
CTTTGTGATTATGTATTTTCTTATTATCCGGCCGCAGCGCCAACAGATGAAGAAGCGCGCGGAAATGCTCGCCAATGTGC
GTCGGGGAGATACGGTCGTCACAGGCGGCGGTCTCGTGGGCAAGGTGACCAAGGTCATCAATGACAGCGAGCTTGAGATC
GATCTCGGCGGGACGAAGGTGACAGCCTTGCGCTCAATGCTGGCAGATGTACGTGTGAAGGGTGAACCGACGGCGACCGA
AAAGGCCGTTAAATAG

Upstream 100 bases:

>100_bases
TGCGCAACCGTTGCAGGCGGTTGCAAACAGGGGCCGAACATCTATATTCCGCGCAGTTTTTCTCGGGCTGACGCTCAGCC
TCTGATCTCAGGAGTGGTTC

Downstream 100 bases:

>100_bases
CCCGCTTCAAGCGGGATTCTGGGGCTGGCCTGCATGAAAGGCCGGCCTGAACGACAAGAGACAACATGCTACATTTCTCG
CGCTGGCAGACATTCTTCAT

Product: protein translocase subunit yajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MFVTPAYAQAAAGAPDMLISILPFVLIFVIMYFLIIRPQRQQMKKRAEMLANVRRGDTVVTGGGLVGKVTKVINDSELEI
DLGGTKVTALRSMLADVRVKGEPTATEKAVK

Sequences:

>Translated_111_residues
MFVTPAYAQAAAGAPDMLISILPFVLIFVIMYFLIIRPQRQQMKKRAEMLANVRRGDTVVTGGGLVGKVTKVINDSELEI
DLGGTKVTALRSMLADVRVKGEPTATEKAVK
>Mature_111_residues
MFVTPAYAQAAAGAPDMLISILPFVLIFVIMYFLIIRPQRQQMKKRAEMLANVRRGDTVVTGGGLVGKVTKVINDSELEI
DLGGTKVTALRSMLADVRVKGEPTATEKAVK

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=103, Percent_Identity=35.9223300970874, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12049; Mature: 12049

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTPAYAQAAAGAPDMLISILPFVLIFVIMYFLIIRPQRQQMKKRAEMLANVRRGDTVV
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEE
TGGGLVGKVTKVINDSELEIDLGGTKVTALRSMLADVRVKGEPTATEKAVK
ECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure
MFVTPAYAQAAAGAPDMLISILPFVLIFVIMYFLIIRPQRQQMKKRAEMLANVRRGDTVV
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEE
TGGGLVGKVTKVINDSELEIDLGGTKVTALRSMLADVRVKGEPTATEKAVK
ECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]