| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634146
Identifier: 110634146
GI number: 110634146
Start: 1921039
End: 1921428
Strand: Reverse
Name: 110634146
Synonym: Meso_1795
Alternate gene names: NA
Gene position: 1921428-1921039 (Counterclockwise)
Preceding gene: 110634147
Following gene: 110634145
Centisome position: 43.55
GC content: 65.38
Gene sequence:
>390_bases ATGGCGGGGGGAATCGAGATACGCGCGGCCCACTTCCCTGGCCGCGCGCCGATAGATGCTTACGGCAATGGGGGCTTCCG CTTCGCGGATATGTCCCATCGCGGCTCGCTGCTCTGCCTGCCCTCCGGCATCTATGGGTGGGTGGCGAAGGATGTGGACT CGCTCGCAGAAGAGGATTTCGCGCGGCTTTTGGATGAAGCGGGCGAAATCCAGATCCTGCTTGTGGGCACCGGCCAGACG CTGAAGCCCCTGCCGCAGGGGTTGCGCCAGCGGCTGCAGGTAACGGGGATGGCAGTCGAGATCATGTCGACCGGGGCTGC CGCCCGCACCTTCAATGTACTGCTGGCGGAAGAGAGGGCGGTAGCGGCGGCGCTGATCGCCGTCGACTAA
Upstream 100 bases:
>100_bases TCCTCATCTTCTTCAAGCTGCGGCCGGTGAGCGGCCCGGTGGTGGACACGGAACCGGCCGCCGCCGACACCGAGGCGGCC CCACACGTTCCGTCACGCTG
Downstream 100 bases:
>100_bases GATGACACCCTCCGGCGCCGAAATGGCCGTACGCGTTCGCCAAGCCGATCCGGACCGCTATCTTGCCACACTCTATGCGC CCGTTGAAAAGCGTGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF124 [H]
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MAGGIEIRAAHFPGRAPIDAYGNGGFRFADMSHRGSLLCLPSGIYGWVAKDVDSLAEEDFARLLDEAGEIQILLVGTGQT LKPLPQGLRQRLQVTGMAVEIMSTGAAARTFNVLLAEERAVAAALIAVD
Sequences:
>Translated_129_residues MAGGIEIRAAHFPGRAPIDAYGNGGFRFADMSHRGSLLCLPSGIYGWVAKDVDSLAEEDFARLLDEAGEIQILLVGTGQT LKPLPQGLRQRLQVTGMAVEIMSTGAAARTFNVLLAEERAVAAALIAVD >Mature_128_residues AGGIEIRAAHFPGRAPIDAYGNGGFRFADMSHRGSLLCLPSGIYGWVAKDVDSLAEEDFARLLDEAGEIQILLVGTGQTL KPLPQGLRQRLQVTGMAVEIMSTGAAARTFNVLLAEERAVAAALIAVD
Specific function: Not required for the biogenesis of c-type cytochromes [H]
COG id: COG3737
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007523 [H]
Pfam domain/function: PF04430 DUF498 [H]
EC number: NA
Molecular weight: Translated: 13638; Mature: 13507
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGIEIRAAHFPGRAPIDAYGNGGFRFADMSHRGSLLCLPSGIYGWVAKDVDSLAEEDF CCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHH ARLLDEAGEIQILLVGTGQTLKPLPQGLRQRLQVTGMAVEIMSTGAAARTFNVLLAEERA HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHEEEEEECCCC VAAALIAVD EEEEEEECC >Mature Secondary Structure AGGIEIRAAHFPGRAPIDAYGNGGFRFADMSHRGSLLCLPSGIYGWVAKDVDSLAEEDF CCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHH ARLLDEAGEIQILLVGTGQTLKPLPQGLRQRLQVTGMAVEIMSTGAAARTFNVLLAEERA HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHEEEEEECCCC VAAALIAVD EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1310666 [H]