Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 110634132

GI number: 110634132

Start: 1902078

End: 1903589

Strand: Reverse

Name: sufB [C]

Synonym: Meso_1781

Alternate gene names: 110634132

Gene position: 1903589-1902078 (Counterclockwise)

Preceding gene: 110634133

Following gene: 110634131

Centisome position: 43.14

GC content: 59.39

Gene sequence:

>1512_bases
ATGCCTGCAGTGCAGGAGACGATCGATCAGGTCCGGTTGATCGATGTGGACCAGTACAAATACGGATTCGAGACGCTCAT
CGAGAGCGACAAGGCCCCCAAGGGGCTCAATGAGGATATCGTCCGGCTGATTTCCGCCAAGAAGGGCGAACCGGAGTGGA
TGACCGAATGGCGCCTCAACGCGTTTCGCCGCTGGCTCACAATGGAAGAGCCGAGCTGGGCGCGCGTCAGCTATCCGAAG
ATCGACTTCCAGGACATCCATTATTATGCGGCGCCCAAGACCCAGGCTGGGCCGACCTCGCTGGACGAGGTGGATCCGGA
GCTGCTGCGCACCTATGAAAAGCTCGGCATTCCGTTGAAGGAGCAGGAAATCCTGGCGGGCGTGCGAAAGCCGGCCGAGG
GCGAGGACGCGGGCGATAACGTCTACGCCTCGGGCCGCGTGGCGGTGGACGCCGTTTTCGATTCCGTCTCGGTGGTGACC
ACCTTCAAGAAGGAACTCGCGAAGGCGGGCGTCATCTTCTGCTCGATCTCGGAGGCCATCCGCGAGCATCCGGAACTCGT
GCGCAAATATCTGGGCTCGGTCGTTCCGCCCACGGACAATTTCTACGCGACGCTCAACTCGGCGGTCTTTACGGACGGTT
CCTTCGTCTATGTGCCCAAGGGCGTACGCTGCCCGATGGAGCTTTCCACCTATTTCCGCATCAACGAGAAGAATACGGGC
CAGTTCGAGCGCACGCTGATCATCGCCGACGAGGGCGCGTATGTCTCCTATCTGGAGGGCTGCACCGCACCGCAGCGCGA
CGAGAACCAGCTGCATGCGGCGGTGGTGGAGCTTGTGGCGCTCGACGATGCCGAAATCAAATACTCGACGGTGCAAAACT
GGTATCCGGGCGATAAGCAAGGCAAAGGCGGCATCTACAACTTTGTCACCAAACGTGGCGATTGCCGGGGCAAGAACTCC
AAGATCTCCTGGACCCAGGTCGAGACCGGCTCGGCCATCACCTGGAAATATCCGTCCTGCCTGCTGCGCGGCGAAGGTTC
ACGCGGCGAGTTTTATTCGATCGCGGTCTCAAACGGGCATCAGCAGATCGATTCCGGCACGAAGATGATACATCTCGGCA
AGAACACATCGAGCCGCATCATCTCCAAGGGCATTTCGGCGGGTAACTCGAACAACACCTATCGCGGCCAGGTTTCCGTG
CACCGCAAGGCGGAGAACGCGCGCAATTTCACGAATTGCGATTCGCTGCTCATCGGCAATGACTGCGGCGCCCACACCGT
GCCCTATATCGAGGCGAAGAACTCCACCGCCCAGATCGAGCACGAGGCGACCACGTCGAAGATTTCCGATGATCAGAAGT
TTTATGTGATGCAGCGCGGCATCCCCGAGGAGGAGGCGATTGCGCTGATCGTCAATGGTTTCGTGAAGGATGTCATCCAG
GAATTGCCGATGGAGTTCGCCGTCGAGGCGCAGAAGCTGATCGGCATTTCGCTTGAAGGTTCGGTCGGCTGA

Upstream 100 bases:

>100_bases
CCGCATGGGTGAATTCGATGGGTGCGCTTCCTAAATAGGGGGCATGCCACAATGTAGGGTAACTGCCGGACCTTGAATCC
GGCGTGATGGAGAGACGCTG

Downstream 100 bases:

>100_bases
GTGGGCCGCAGACAGTTTGGGATAGGAATTATGCTTGAGATCAAGAACCTGCATGCCCGCATCGCCGAAGACGGCACAGA
GATCCTGCGCGGGGTGAACC

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MPAVQETIDQVRLIDVDQYKYGFETLIESDKAPKGLNEDIVRLISAKKGEPEWMTEWRLNAFRRWLTMEEPSWARVSYPK
IDFQDIHYYAAPKTQAGPTSLDEVDPELLRTYEKLGIPLKEQEILAGVRKPAEGEDAGDNVYASGRVAVDAVFDSVSVVT
TFKKELAKAGVIFCSISEAIREHPELVRKYLGSVVPPTDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTG
QFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKQGKGGIYNFVTKRGDCRGKNS
KISWTQVETGSAITWKYPSCLLRGEGSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIISKGISAGNSNNTYRGQVSV
HRKAENARNFTNCDSLLIGNDCGAHTVPYIEAKNSTAQIEHEATTSKISDDQKFYVMQRGIPEEEAIALIVNGFVKDVIQ
ELPMEFAVEAQKLIGISLEGSVG

Sequences:

>Translated_503_residues
MPAVQETIDQVRLIDVDQYKYGFETLIESDKAPKGLNEDIVRLISAKKGEPEWMTEWRLNAFRRWLTMEEPSWARVSYPK
IDFQDIHYYAAPKTQAGPTSLDEVDPELLRTYEKLGIPLKEQEILAGVRKPAEGEDAGDNVYASGRVAVDAVFDSVSVVT
TFKKELAKAGVIFCSISEAIREHPELVRKYLGSVVPPTDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTG
QFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKQGKGGIYNFVTKRGDCRGKNS
KISWTQVETGSAITWKYPSCLLRGEGSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIISKGISAGNSNNTYRGQVSV
HRKAENARNFTNCDSLLIGNDCGAHTVPYIEAKNSTAQIEHEATTSKISDDQKFYVMQRGIPEEEAIALIVNGFVKDVIQ
ELPMEFAVEAQKLIGISLEGSVG
>Mature_502_residues
PAVQETIDQVRLIDVDQYKYGFETLIESDKAPKGLNEDIVRLISAKKGEPEWMTEWRLNAFRRWLTMEEPSWARVSYPKI
DFQDIHYYAAPKTQAGPTSLDEVDPELLRTYEKLGIPLKEQEILAGVRKPAEGEDAGDNVYASGRVAVDAVFDSVSVVTT
FKKELAKAGVIFCSISEAIREHPELVRKYLGSVVPPTDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQ
FERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKQGKGGIYNFVTKRGDCRGKNSK
ISWTQVETGSAITWKYPSCLLRGEGSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIISKGISAGNSNNTYRGQVSVH
RKAENARNFTNCDSLLIGNDCGAHTVPYIEAKNSTAQIEHEATTSKISDDQKFYVMQRGIPEEEAIALIVNGFVKDVIQE
LPMEFAVEAQKLIGISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=500, Percent_Identity=60.2, Blast_Score=637, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 55879; Mature: 55748

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVQETIDQVRLIDVDQYKYGFETLIESDKAPKGLNEDIVRLISAKKGEPEWMTEWRLN
CCCHHHHHHHEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AFRRWLTMEEPSWARVSYPKIDFQDIHYYAAPKTQAGPTSLDEVDPELLRTYEKLGIPLK
HHHHHHCCCCCCCCEEECCCCCHHHEEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCC
EQEILAGVRKPAEGEDAGDNVYASGRVAVDAVFDSVSVVTTFKKELAKAGVIFCSISEAI
HHHHHHHHCCCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHCEEEEEHHHHH
REHPELVRKYLGSVVPPTDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTG
HHHHHHHHHHHCCCCCCCCCHHEEECCEEEECCCEEEECCCCCCCCEEEEEEEECCCCCC
QFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKQ
CEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCC
GKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCLLRGEGSRGEFYSIAVSNGH
CCCCHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEECCCC
QQIDSGTKMIHLGKNTSSRIISKGISAGNSNNTYRGQVSVHRKAENARNFTNCDSLLIGN
HHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEEEEECHHCCCCCCCCCCEEEEC
DCGAHTVPYIEAKNSTAQIEHEATTSKISDDQKFYVMQRGIPEEEAIALIVNGFVKDVIQ
CCCCCCCCEEEECCCCEEEEHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
ELPMEFAVEAQKLIGISLEGSVG
HCCHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
PAVQETIDQVRLIDVDQYKYGFETLIESDKAPKGLNEDIVRLISAKKGEPEWMTEWRLN
CCHHHHHHHEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AFRRWLTMEEPSWARVSYPKIDFQDIHYYAAPKTQAGPTSLDEVDPELLRTYEKLGIPLK
HHHHHHCCCCCCCCEEECCCCCHHHEEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCC
EQEILAGVRKPAEGEDAGDNVYASGRVAVDAVFDSVSVVTTFKKELAKAGVIFCSISEAI
HHHHHHHHCCCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHCEEEEEHHHHH
REHPELVRKYLGSVVPPTDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTG
HHHHHHHHHHHCCCCCCCCCHHEEECCEEEECCCEEEECCCCCCCCEEEEEEEECCCCCC
QFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKQ
CEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCC
GKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCLLRGEGSRGEFYSIAVSNGH
CCCCHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEECCCC
QQIDSGTKMIHLGKNTSSRIISKGISAGNSNNTYRGQVSVHRKAENARNFTNCDSLLIGN
HHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEEEEECHHCCCCCCCCCCEEEEC
DCGAHTVPYIEAKNSTAQIEHEATTSKISDDQKFYVMQRGIPEEEAIALIVNGFVKDVIQ
CCCCCCCCEEEECCCCEEEEHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
ELPMEFAVEAQKLIGISLEGSVG
HCCHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]