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The map label for this gene is exoI [H]

Identifier: 110633907

GI number: 110633907

Start: 1672274

End: 1672882

Strand: Direct

Name: exoI [H]

Synonym: Meso_1554

Alternate gene names: 110633907

Gene position: 1672274-1672882 (Clockwise)

Preceding gene: 110633905

Following gene: 110633908

Centisome position: 37.9

GC content: 59.28

Gene sequence:

>609_bases
ATGCGTGTAAGTCGTAGAAATTATTGGCGTAGTAGACGGAATCCGAGGCGGCCGCACCGATGGGCCGATATCCTTCTTTC
AGCGGGAATACTCACGCTTCTGGCGCTTACGGTTGCGAGGCTGGACCAGGTCGCCACGCGCCATCTTTCAGGATCTTTCA
GGATTAACGACGGCGACAGTCTCACGATAAATGGTGAGCGCATCCGTCTCCGCGGGATCGATGCCCCTGAACTTGATCAG
CAGTGTTCCTTGGAAGGTCTGTCCTATGCGTGCGGGCAGCGGGCCCGACAGGCATTGAGCCAACTCACGAACTCCGGTTC
TCTTTCCTGCAGCGGCTGGGAGCGAGACCGTTACGGGCGTCTTCTTGCGCGATGCGAGGCGGGGGGCCGCGATCTCGGCC
AGACAATGGTGGAAACCGGCTGGGCGATTTCCTATGGTGATTACACCCTTTCGGAAGCCGAAGCGAAACGGGCTGGCAAA
GGGCTTTGGGCAGGTGCCTTCGAGGATCCGCGCGACTGGCGCACTCGAAACAATTCGCCCAACGAAACGCCGCACGACTG
GCTCGGACGGCTCGTCAACTTTTTGCGGCAAGTCTCCGGAATGACGTGA

Upstream 100 bases:

>100_bases
ACTTGTCCGCCATTTGGTTTTGATTCAACACCATCGGACGCGTCGCATTTCCGGCATGGTTCCATAAATACCGGCGAATA
ATTAAGAGACCCTTCAGTTA

Downstream 100 bases:

>100_bases
GGCGAAAGGACGGGGAGGGACACATGAAGCTCTATGACGGCGGGAGGGCACCCAACCCGAGGCGTGTGCGCATCTTTCTT
GCTGAGAAGGGAATTCAGGT

Product: nuclease (SNase-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRVSRRNYWRSRRNPRRPHRWADILLSAGILTLLALTVARLDQVATRHLSGSFRINDGDSLTINGERIRLRGIDAPELDQ
QCSLEGLSYACGQRARQALSQLTNSGSLSCSGWERDRYGRLLARCEAGGRDLGQTMVETGWAISYGDYTLSEAEAKRAGK
GLWAGAFEDPRDWRTRNNSPNETPHDWLGRLVNFLRQVSGMT

Sequences:

>Translated_202_residues
MRVSRRNYWRSRRNPRRPHRWADILLSAGILTLLALTVARLDQVATRHLSGSFRINDGDSLTINGERIRLRGIDAPELDQ
QCSLEGLSYACGQRARQALSQLTNSGSLSCSGWERDRYGRLLARCEAGGRDLGQTMVETGWAISYGDYTLSEAEAKRAGK
GLWAGAFEDPRDWRTRNNSPNETPHDWLGRLVNFLRQVSGMT
>Mature_202_residues
MRVSRRNYWRSRRNPRRPHRWADILLSAGILTLLALTVARLDQVATRHLSGSFRINDGDSLTINGERIRLRGIDAPELDQ
QCSLEGLSYACGQRARQALSQLTNSGSLSCSGWERDRYGRLLARCEAGGRDLGQTMVETGWAISYGDYTLSEAEAKRAGK
GLWAGAFEDPRDWRTRNNSPNETPHDWLGRLVNFLRQVSGMT

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 22778; Mature: 22778

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSRRNYWRSRRNPRRPHRWADILLSAGILTLLALTVARLDQVATRHLSGSFRINDGDS
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCE
LTINGERIRLRGIDAPELDQQCSLEGLSYACGQRARQALSQLTNSGSLSCSGWERDRYGR
EEECCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LLARCEAGGRDLGQTMVETGWAISYGDYTLSEAEAKRAGKGLWAGAFEDPRDWRTRNNSP
HHHHHHCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCC
NETPHDWLGRLVNFLRQVSGMT
CCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVSRRNYWRSRRNPRRPHRWADILLSAGILTLLALTVARLDQVATRHLSGSFRINDGDS
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCE
LTINGERIRLRGIDAPELDQQCSLEGLSYACGQRARQALSQLTNSGSLSCSGWERDRYGR
EEECCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LLARCEAGGRDLGQTMVETGWAISYGDYTLSEAEAKRAGKGLWAGAFEDPRDWRTRNNSP
HHHHHHCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCC
NETPHDWLGRLVNFLRQVSGMT
CCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8118055; 11481431 [H]