| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632899
Identifier: 110632899
GI number: 110632899
Start: 592979
End: 593947
Strand: Reverse
Name: 110632899
Synonym: Meso_0539
Alternate gene names: NA
Gene position: 593947-592979 (Counterclockwise)
Preceding gene: 110632908
Following gene: 110632898
Centisome position: 13.46
GC content: 68.11
Gene sequence:
>969_bases ATGTCGAAACGTGATCCACGCGGCCGGCCGAGCGCTGACCGGACGAGCCTGTATGACGAAATCACCGGCAAGATCCTGGC CGAACTGGAGGCCGGACGGTTGCCCTGGGTCCAGCCCTGGGGGACGGCCGCGGCCAAGGCGCCACTCGCCATGCCGACCA ACGCTGCGACCGGGCGCGGCTACTCAGGGGTCAATGTGCTGATCCTCTGGGGCGCGGTGATCTCGCTTGGCTTCCCGAGC CAAGGCTGGCTGACCTTCCGCCAGGCCCTGTCGCTTGGCGGCAATGTCCGGAAGGGCGAGCGCGGCACCACCGTCGTCTA TGCCGACCGCTTCGTGCCGGACGATGAACGCCGTCGTGCGCGAGAGACCGGTGAGGAGGCACAGGCGATCCCGTTCCTGA AGCGCTTCACGGTCTTCAACGTCGCTCAGTGTGACGGCCTGCCTGAGGACCTCGTGGCCGCCGTGCCGGCGCCCGAACCC GGGCTGATCGAGCCCACGGTCGACGCGCTGATCCGGGCGAGCGGGATCGACTTTCGCATCGGCGGCGACCGGGCTTACTA CGCGCCGGCACCTGACTATGTGATGGTGCCGCCGCCCCAGGCCTTCTTCGAGCCCATCAACTGGCATCGCACGGCGCTGC ATGAATGCGCCCATGCCAGCGGCGCGGTCCATCGGCTGGGACGCGATCTCACAGGATCGTTCGGCTCCAAGAAATACGCG TTCGAGGAACTGGTGGCCGAAATCGCCTCGGCCTTCTGCTGCGCCGCCCTCGGCATCGCCCCGACCGTCCGCCACGCCGA CTACATCGGATCCTGGGCCGAGGTCCTGCGCGAGGACAATCGCGCCATCGTCCGTGCAGCCAGTCAGGCAAGCAAGGCAG CGGACTGGTTGCTGGCCTTCGCCCCAAATGCGGGCGAACCGGGTCAGGCAATTGCCACCACCCCCGAGGCAGCACGCCAG GCGGCCTGA
Upstream 100 bases:
>100_bases CCCCCGCAACGCCCCCCGAGAGTGAGAGTGCAGGCCGGGTGTGCCGTGACGGGTTGAAGGCTGGGAGAGAGGCTTCCGGC GCCCGTCGCGGAGACCCGCG
Downstream 100 bases:
>100_bases CCGACTCGTTATCGTTCCAAGCATCGGCGCAGTCCCGTCTTTCCGGCTCTACGGCGTTCCGGCTTTCCGGCTTTCCGGAA GCAATGAGAGGAAGAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSKRDPRGRPSADRTSLYDEITGKILAELEAGRLPWVQPWGTAAAKAPLAMPTNAATGRGYSGVNVLILWGAVISLGFPS QGWLTFRQALSLGGNVRKGERGTTVVYADRFVPDDERRRARETGEEAQAIPFLKRFTVFNVAQCDGLPEDLVAAVPAPEP GLIEPTVDALIRASGIDFRIGGDRAYYAPAPDYVMVPPPQAFFEPINWHRTALHECAHASGAVHRLGRDLTGSFGSKKYA FEELVAEIASAFCCAALGIAPTVRHADYIGSWAEVLREDNRAIVRAASQASKAADWLLAFAPNAGEPGQAIATTPEAARQ AA
Sequences:
>Translated_322_residues MSKRDPRGRPSADRTSLYDEITGKILAELEAGRLPWVQPWGTAAAKAPLAMPTNAATGRGYSGVNVLILWGAVISLGFPS QGWLTFRQALSLGGNVRKGERGTTVVYADRFVPDDERRRARETGEEAQAIPFLKRFTVFNVAQCDGLPEDLVAAVPAPEP GLIEPTVDALIRASGIDFRIGGDRAYYAPAPDYVMVPPPQAFFEPINWHRTALHECAHASGAVHRLGRDLTGSFGSKKYA FEELVAEIASAFCCAALGIAPTVRHADYIGSWAEVLREDNRAIVRAASQASKAADWLLAFAPNAGEPGQAIATTPEAARQ AA >Mature_321_residues SKRDPRGRPSADRTSLYDEITGKILAELEAGRLPWVQPWGTAAAKAPLAMPTNAATGRGYSGVNVLILWGAVISLGFPSQ GWLTFRQALSLGGNVRKGERGTTVVYADRFVPDDERRRARETGEEAQAIPFLKRFTVFNVAQCDGLPEDLVAAVPAPEPG LIEPTVDALIRASGIDFRIGGDRAYYAPAPDYVMVPPPQAFFEPINWHRTALHECAHASGAVHRLGRDLTGSFGSKKYAF EELVAEIASAFCCAALGIAPTVRHADYIGSWAEVLREDNRAIVRAASQASKAADWLLAFAPNAGEPGQAIATTPEAARQA A
Specific function: Unknown
COG id: COG4227
COG function: function code L; Antirestriction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017113 - InterPro: IPR013610 [H]
Pfam domain/function: PF08401 DUF1738 [H]
EC number: NA
Molecular weight: Translated: 34580; Mature: 34449
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRDPRGRPSADRTSLYDEITGKILAELEAGRLPWVQPWGTAAAKAPLAMPTNAATGRG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC YSGVNVLILWGAVISLGFPSQGWLTFRQALSLGGNVRKGERGTTVVYADRFVPDDERRRA CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHH RETGEEAQAIPFLKRFTVFNVAQCDGLPEDLVAAVPAPEPGLIEPTVDALIRASGIDFRI HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEE GGDRAYYAPAPDYVMVPPPQAFFEPINWHRTALHECAHASGAVHRLGRDLTGSFGSKKYA CCCEEEECCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHH FEELVAEIASAFCCAALGIAPTVRHADYIGSWAEVLREDNRAIVRAASQASKAADWLLAF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEE APNAGEPGQAIATTPEAARQAA CCCCCCCCCEEECCHHHHHHCC >Mature Secondary Structure SKRDPRGRPSADRTSLYDEITGKILAELEAGRLPWVQPWGTAAAKAPLAMPTNAATGRG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC YSGVNVLILWGAVISLGFPSQGWLTFRQALSLGGNVRKGERGTTVVYADRFVPDDERRRA CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHH RETGEEAQAIPFLKRFTVFNVAQCDGLPEDLVAAVPAPEPGLIEPTVDALIRASGIDFRI HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEE GGDRAYYAPAPDYVMVPPPQAFFEPINWHRTALHECAHASGAVHRLGRDLTGSFGSKKYA CCCEEEECCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHH FEELVAEIASAFCCAALGIAPTVRHADYIGSWAEVLREDNRAIVRAASQASKAADWLLAF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEE APNAGEPGQAIATTPEAARQAA CCCCCCCCCEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]