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The map label for this gene is 110632908

Identifier: 110632908

GI number: 110632908

Start: 608528

End: 609562

Strand: Reverse

Name: 110632908

Synonym: Meso_0548

Alternate gene names: NA

Gene position: 609562-608528 (Counterclockwise)

Preceding gene: 110632909

Following gene: 110632899

Centisome position: 13.81

GC content: 61.26

Gene sequence:

>1035_bases
ATGAACTATGTCCCGCCGCGGCGATCGGACGGCACCATCCAACACGCACGCTTAAAGCAGCCATGGCCGCGGGGCCGCCC
GTTCCGCATCCTGTCGATCGACGGCGGCGGAATTCGTGGCGTCTTTCCGGCGGCAGTCCTGGCGGAACTAGAAAGCCGCT
TCCTGGGCGGCGCATCCATCGCAAATCACTTCGACATGATCGCGGGCACGTCAACGGGCGGCATCATCGCGCTCGCCCTT
GCCCATGGGATGACGGCTCGACAGGCATTGAACATCTATCTTGAGCGCGGCGATCGCATCTTTCCGCCGGCGGCTGGCCT
CGGCAAGGTGTCGAGAGCGCTGCGCTGGGTGTTCAAACCGAAGCACGACCAGACCGCCCTCAAGGACGAGTTACTGCGGA
TCTTTGGTGGCAAAGTGCTCGATGATGCCATTACCCGGCTGGTGATCCCGAGCTTCGAAGGTCGCCACGGCGAGCCATTC
CTCTACAAGACGCCGCACCACCCGGACTACCAGAAGGATCGCCACAAGAAGTTTGCCCATGTGGCGCTCCACACGACGGC
AGCCCCGTCCTATTACCCTGGCGTTGAGGACGACGGTTACATCATGATTGATGGCGGCATCTGGGCAAACAATCCGGTCA
TGAACGCCCTGGTAGACGCCCTGGCCTGCTTCGACATCGCGCGTGAGGACGTACGTATCCTGAGCCTGGGAACGGGTGAG
TCCACCTTCACTGTCGATGAGCGGGCGCGCAACGGTGGGATCAAGGATTGGGCGTTCCTGCGCTCTTTCAATGCGGCGGC
ACGCGCACAGTCCCGAAATGCCCTCGGCCAGGCCTATCTGCTGATCGGCAAAAACAACGTCACACGTATCGACGTGCCGG
AAAGCGATGCGCCAATCGCAATGGACGACGTGCAACGCTCAATTCGGGAACTGCCGATGGTAGCGCGCAGTCTTGTTGAA
GGCGCCGGGCACCATATCGAGCGGGTATTTCTGGACGGCGAGGTCGAGCAGTATATCCGGTGTCCGATAACGTAG

Upstream 100 bases:

>100_bases
ACTGGCTCGCTTGCTACGAACTTTGGTTGATGACCGGGCGCTGGACCGGCGGCGGACGCCACGCCGGCCAGTTGGTCAAC
CATGCAAGGGAGACAACAGG

Downstream 100 bases:

>100_bases
GCTTCTAATTTCGCATGTTCCCTACCGGGCCGTGAGCAAACGACAGGCGAGCTCGCGCTCGCCCCAACGGGTCGAAAAAG
TGTCGGAGACCTCAAACCAG

Product: patatin

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase; Patatin-Related Protein; Patatin-Like Protein; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin Family Phospholipase; Phospholipase

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNYVPPRRSDGTIQHARLKQPWPRGRPFRILSIDGGGIRGVFPAAVLAELESRFLGGASIANHFDMIAGTSTGGIIALAL
AHGMTARQALNIYLERGDRIFPPAAGLGKVSRALRWVFKPKHDQTALKDELLRIFGGKVLDDAITRLVIPSFEGRHGEPF
LYKTPHHPDYQKDRHKKFAHVALHTTAAPSYYPGVEDDGYIMIDGGIWANNPVMNALVDALACFDIAREDVRILSLGTGE
STFTVDERARNGGIKDWAFLRSFNAAARAQSRNALGQAYLLIGKNNVTRIDVPESDAPIAMDDVQRSIRELPMVARSLVE
GAGHHIERVFLDGEVEQYIRCPIT

Sequences:

>Translated_344_residues
MNYVPPRRSDGTIQHARLKQPWPRGRPFRILSIDGGGIRGVFPAAVLAELESRFLGGASIANHFDMIAGTSTGGIIALAL
AHGMTARQALNIYLERGDRIFPPAAGLGKVSRALRWVFKPKHDQTALKDELLRIFGGKVLDDAITRLVIPSFEGRHGEPF
LYKTPHHPDYQKDRHKKFAHVALHTTAAPSYYPGVEDDGYIMIDGGIWANNPVMNALVDALACFDIAREDVRILSLGTGE
STFTVDERARNGGIKDWAFLRSFNAAARAQSRNALGQAYLLIGKNNVTRIDVPESDAPIAMDDVQRSIRELPMVARSLVE
GAGHHIERVFLDGEVEQYIRCPIT
>Mature_344_residues
MNYVPPRRSDGTIQHARLKQPWPRGRPFRILSIDGGGIRGVFPAAVLAELESRFLGGASIANHFDMIAGTSTGGIIALAL
AHGMTARQALNIYLERGDRIFPPAAGLGKVSRALRWVFKPKHDQTALKDELLRIFGGKVLDDAITRLVIPSFEGRHGEPF
LYKTPHHPDYQKDRHKKFAHVALHTTAAPSYYPGVEDDGYIMIDGGIWANNPVMNALVDALACFDIAREDVRILSLGTGE
STFTVDERARNGGIKDWAFLRSFNAAARAQSRNALGQAYLLIGKNNVTRIDVPESDAPIAMDDVQRSIRELPMVARSLVE
GAGHHIERVFLDGEVEQYIRCPIT

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17544092, Length=243, Percent_Identity=29.2181069958848, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI212646132, Length=225, Percent_Identity=27.1111111111111, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17541042, Length=204, Percent_Identity=28.4313725490196, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567809, Length=247, Percent_Identity=28.7449392712551, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45551543, Length=246, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45551542, Length=246, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45551541, Length=246, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45550585, Length=246, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37952; Mature: 37952

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVPPRRSDGTIQHARLKQPWPRGRPFRILSIDGGGIRGVFPAAVLAELESRFLGGASI
CCCCCCCCCCCCEEHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHH
ANHFDMIAGTSTGGIIALALAHGMTARQALNIYLERGDRIFPPAAGLGKVSRALRWVFKP
HHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCC
KHDQTALKDELLRIFGGKVLDDAITRLVIPSFEGRHGEPFLYKTPHHPDYQKDRHKKFAH
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHE
VALHTTAAPSYYPGVEDDGYIMIDGGIWANNPVMNALVDALACFDIAREDVRILSLGTGE
EEEEECCCCCCCCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCC
STFTVDERARNGGIKDWAFLRSFNAAARAQSRNALGQAYLLIGKNNVTRIDVPESDAPIA
CEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCEE
MDDVQRSIRELPMVARSLVEGAGHHIERVFLDGEVEQYIRCPIT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHEECCCC
>Mature Secondary Structure
MNYVPPRRSDGTIQHARLKQPWPRGRPFRILSIDGGGIRGVFPAAVLAELESRFLGGASI
CCCCCCCCCCCCEEHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHH
ANHFDMIAGTSTGGIIALALAHGMTARQALNIYLERGDRIFPPAAGLGKVSRALRWVFKP
HHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCC
KHDQTALKDELLRIFGGKVLDDAITRLVIPSFEGRHGEPFLYKTPHHPDYQKDRHKKFAH
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHE
VALHTTAAPSYYPGVEDDGYIMIDGGIWANNPVMNALVDALACFDIAREDVRILSLGTGE
EEEEECCCCCCCCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCC
STFTVDERARNGGIKDWAFLRSFNAAARAQSRNALGQAYLLIGKNNVTRIDVPESDAPIA
CEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCEE
MDDVQRSIRELPMVARSLVEGAGHHIERVFLDGEVEQYIRCPIT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA