| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is ybhG [C]
Identifier: 109948215
GI number: 109948215
Start: 1522328
End: 1523332
Strand: Reverse
Name: ybhG [C]
Synonym: Hac_1748
Alternate gene names: 109948215
Gene position: 1523332-1522328 (Counterclockwise)
Preceding gene: 109948216
Following gene: 109948214
Centisome position: 98.03
GC content: 42.49
Gene sequence:
>1005_bases ATGTTAAGAAAAATCATGTTAAACAGCAAGTTGGATCAAAAGAAAGCCGCTTTTATAGGGGGTGGGGTTTTATTGTTGGG GCTTATCGTTTTATTTTATTTGGCTTATCGCCCTAGGGCTGAAGTGTTGCAAGGGTTTTTGGAAGCCAGAGAATACAGCG TGAGCTCCAAAGTCTCTGGACGCATTGAAAAGGTGTTTGTTAAAAAAGGCGATCAAATCAAAAAAGGCGATCTAGCCTTT AGCATTTCTAGCCCTGAATTAGAAGCCAAGCTCGCTCAAGCCGAAGCTGGGCACAAAGCCGCTAAAGCGCTTAGCGATGA AGTCAAAAGAGGCTCTAGAGATGAAATGATTAATTCCGCAAGAGATATTTGGCAAGCGGCTAAATCTCAAGCGACTCTAG CCAAAGAGACTTATAAGCGTGTTCAAGATTTGTATGATAATGGCGTGGCGAGTTTGCAAAAGCGCGATGAAGCCTATGCG GCTTATGAAAGCACCAAATACAACGAGAGCGCAGCTTATCAAAAGTATAAAATGGCTTTAGGGGGTGCGAGCTCTGAAAG TAAGATTGCTGCTAAAGCTAAAGAGAGCGCGGCGTTAGGGCAGGTGAATGAAGTGGAATCCTATTTAAAAGATGTTAAAG CGACTGCCCCTATTGATGGGGAGGTGAGCAATGTGCTTTTAAGTAGCGGTGAGCTTAGTCCTAAAGGTTTTCCTGTGGTG CTCATGATAGATTTAAAGGATAGTTGGTTAAAAATCAGCGTGCCTGAAAAGTATTTGAGCGATTTTGAAGTGGGTAAGGA ATTTGAAGGCTATATCCCGGCGTTGAAAAAGAACGCGAAATTCAAAGTCAAATATTTGAGCGTGATGGGGGATTTTGCGA CTTGGAAAGCGACGAATAATTCTAACACTTACGACATGAAAAGCTATGAAGTGGAGGCCATACCCTTAGAAAAGTTGGAA AATTTTAGGGTAGGGATGAGCGTGTTAGTCACCATTAAACCTTAA
Upstream 100 bases:
>100_bases AGAGCGTGGCTTATAAATACATCGTTTCATTAGCGAATTTAATGGCATTAAGCGATCACATTGATTTATTTTATGAATTT GTTTATTAAAAGGAAAAACC
Downstream 100 bases:
>100_bases AAGGATTGTCTTGTTTAGATTGATAAGCGCATGGGTTTTGCAAGATAAATTCTTGTTTATCGTGTGTTTTATATTACCTT TTTGTTTGGGGATTTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLRKIMLNSKLDQKKAAFIGGGVLLLGLIVLFYLAYRPRAEVLQGFLEAREYSVSSKVSGRIEKVFVKKGDQIKKGDLAF SISSPELEAKLAQAEAGHKAAKALSDEVKRGSRDEMINSARDIWQAAKSQATLAKETYKRVQDLYDNGVASLQKRDEAYA AYESTKYNESAAYQKYKMALGGASSESKIAAKAKESAALGQVNEVESYLKDVKATAPIDGEVSNVLLSSGELSPKGFPVV LMIDLKDSWLKISVPEKYLSDFEVGKEFEGYIPALKKNAKFKVKYLSVMGDFATWKATNNSNTYDMKSYEVEAIPLEKLE NFRVGMSVLVTIKP
Sequences:
>Translated_334_residues MLRKIMLNSKLDQKKAAFIGGGVLLLGLIVLFYLAYRPRAEVLQGFLEAREYSVSSKVSGRIEKVFVKKGDQIKKGDLAF SISSPELEAKLAQAEAGHKAAKALSDEVKRGSRDEMINSARDIWQAAKSQATLAKETYKRVQDLYDNGVASLQKRDEAYA AYESTKYNESAAYQKYKMALGGASSESKIAAKAKESAALGQVNEVESYLKDVKATAPIDGEVSNVLLSSGELSPKGFPVV LMIDLKDSWLKISVPEKYLSDFEVGKEFEGYIPALKKNAKFKVKYLSVMGDFATWKATNNSNTYDMKSYEVEAIPLEKLE NFRVGMSVLVTIKP >Mature_334_residues MLRKIMLNSKLDQKKAAFIGGGVLLLGLIVLFYLAYRPRAEVLQGFLEAREYSVSSKVSGRIEKVFVKKGDQIKKGDLAF SISSPELEAKLAQAEAGHKAAKALSDEVKRGSRDEMINSARDIWQAAKSQATLAKETYKRVQDLYDNGVASLQKRDEAYA AYESTKYNESAAYQKYKMALGGASSESKIAAKAKESAALGQVNEVESYLKDVKATAPIDGEVSNVLLSSGELSPKGFPVV LMIDLKDSWLKISVPEKYLSDFEVGKEFEGYIPALKKNAKFKVKYLSVMGDFATWKATNNSNTYDMKSYEVEAIPLEKLE NFRVGMSVLVTIKP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=305, Percent_Identity=24.2622950819672, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 36894; Mature: 36894
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKIMLNSKLDQKKAAFIGGGVLLLGLIVLFYLAYRPRAEVLQGFLEAREYSVSSKVSG CCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHH RIEKVFVKKGDQIKKGDLAFSISSPELEAKLAQAEAGHKAAKALSDEVKRGSRDEMINSA HHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RDIWQAAKSQATLAKETYKRVQDLYDNGVASLQKRDEAYAAYESTKYNESAAYQKYKMAL HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GGASSESKIAAKAKESAALGQVNEVESYLKDVKATAPIDGEVSNVLLSSGELSPKGFPVV CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEE LMIDLKDSWLKISVPEKYLSDFEVGKEFEGYIPALKKNAKFKVKYLSVMGDFATWKATNN EEEECCCCEEEEECCHHHHHHHHCCCHHHCCCHHHCCCCCEEEEEEEHHCCCCEEEECCC SNTYDMKSYEVEAIPLEKLENFRVGMSVLVTIKP CCCEECCCEEEEEECHHHHHHHCCCEEEEEEECC >Mature Secondary Structure MLRKIMLNSKLDQKKAAFIGGGVLLLGLIVLFYLAYRPRAEVLQGFLEAREYSVSSKVSG CCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHH RIEKVFVKKGDQIKKGDLAFSISSPELEAKLAQAEAGHKAAKALSDEVKRGSRDEMINSA HHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RDIWQAAKSQATLAKETYKRVQDLYDNGVASLQKRDEAYAAYESTKYNESAAYQKYKMAL HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GGASSESKIAAKAKESAALGQVNEVESYLKDVKATAPIDGEVSNVLLSSGELSPKGFPVV CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEE LMIDLKDSWLKISVPEKYLSDFEVGKEFEGYIPALKKNAKFKVKYLSVMGDFATWKATNN EEEECCCCEEEEECCHHHHHHHHCCCHHHCCCHHHCCCCCEEEEEEEHHCCCCEEEECCC SNTYDMKSYEVEAIPLEKLENFRVGMSVLVTIKP CCCEECCCEEEEEECHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]