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The map label for this gene is 109948214

Identifier: 109948214

GI number: 109948214

Start: 1521220

End: 1522317

Strand: Reverse

Name: 109948214

Synonym: Hac_1747

Alternate gene names: NA

Gene position: 1522317-1521220 (Counterclockwise)

Preceding gene: 109948215

Following gene: 109948213

Centisome position: 97.97

GC content: 39.8

Gene sequence:

>1098_bases
TTGTTTAGATTGATAAGCGCATGGGTTTTGCAAGATAAATTCTTGTTTATCGTGTGTTTTATATTACCTTTTTGTTTGGG
GATTTTGGGCAAGCAAATCTTTGAGCAAGAAATCCCAAGACAGCTTCCTATCGTGGTGGTGGATTTGGATAAGACCACTA
CAAGCGTTCAAGTGGCGTTTGAATTAGGCACTACGAGCGCCCTTAAAATCAAATACCAAGTCACTAGCCTTTTAGAAGCC
AAACGCCTTTTAAACTCCGCCGAAGTGTATGGGGCGTTAGTCTTGCCTAAAGATTTAGAGAAAAAAATCAAAATGGGGCG
AAAGGTTGATTTGCCGTTTTATTATAATGCGGAATATGTTTTAGTGGGGAAAACGCTCAAAAACGCCTTTTTGCAAACCG
CTTTGACTTTAGACGCTAAAACTTTAGCCACCAAAGCGTTGGTGCGAGATTCTAATTTGATTTCTGCTAAAGCCCAAGCG
GTGCCTATTCGGCTTGAATTGCATGCCCTATACAATGAAGAAAACAATTACACGCAATACCTTTTAAGCGTGATGCTGCC
TTGCATGTGGCTTATTCTTATTTCTATTGGCATGCTCAATTTCATTCAAAAAATTTCTAACATGCGCGAGCTTTTCATAA
GCATTGCAGCGAATGTGTTTGTGTTTAGCTTTTGGGGGATGGGCATGGCGTTTTATTTTAATTTGATTGGCATGGAGGGG
AATTATGCGCATTTGTCATTAGTCTTTTTGGCGGTCGTTTTAATGGCACTCATTATGAGTGGGTTTGTGGTGTTAGTTTA
TGGCATTTCAAAAAGCGTTATTGAAACCGCCGGTGCGATTGGGGTCTATACCGCTCCAAGCTTTGCGTTTGCTGGGGTGA
CTTACCCACAAAACAACATGGAAACTTTTGGGAGTTTTTGGAGCCATTGCTTGCCCATTAGCCATTTTATGAAGTTCTTT
TTGCAAGAGGCTTATTATAAGACGGATTTTGCAGAGTCTTTGCGTTCGTTAATACCGCTTTTTGTTTTTTTAATCTTTTT
GGCTTTAGGGCTTTTGGTTTTTTATTTTTCTTTCAAAAAAGACAGGGTTAATGCATGA

Upstream 100 bases:

>100_bases
ATGAAAAGCTATGAAGTGGAGGCCATACCCTTAGAAAAGTTGGAAAATTTTAGGGTAGGGATGAGCGTGTTAGTCACCAT
TAAACCTTAAAAGGATTGTC

Downstream 100 bases:

>100_bases
ATTTTTTTAAAATCCTTTTGATGGAGTTAAGGGCTATTGTTTCTCATAAGGGCGTTTTGTTGATCCTTATAGGCGCTCCC
TTAATCTATGGCTTATTATA

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transport System Permease Protein; Permease Component Of ABC Transporter; Transport-Related Membrane Protein; ABC-2 Type Transport System Permease; ABC Transporter Transmembrane Permease; Daunorubicin Resistance Transmembrane Protein; Multidrug ABC Transporter Permease Component; ABC Transporter Permease; ABC-Type Multidrug Transport System; ABC Transporter Transmembrane Protein; ABC-Type Multidrug Transporter Permease Component

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MFRLISAWVLQDKFLFIVCFILPFCLGILGKQIFEQEIPRQLPIVVVDLDKTTTSVQVAFELGTTSALKIKYQVTSLLEA
KRLLNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYVLVGKTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQA
VPIRLELHALYNEENNYTQYLLSVMLPCMWLILISIGMLNFIQKISNMRELFISIAANVFVFSFWGMGMAFYFNLIGMEG
NYAHLSLVFLAVVLMALIMSGFVVLVYGISKSVIETAGAIGVYTAPSFAFAGVTYPQNNMETFGSFWSHCLPISHFMKFF
LQEAYYKTDFAESLRSLIPLFVFLIFLALGLLVFYFSFKKDRVNA

Sequences:

>Translated_365_residues
MFRLISAWVLQDKFLFIVCFILPFCLGILGKQIFEQEIPRQLPIVVVDLDKTTTSVQVAFELGTTSALKIKYQVTSLLEA
KRLLNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYVLVGKTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQA
VPIRLELHALYNEENNYTQYLLSVMLPCMWLILISIGMLNFIQKISNMRELFISIAANVFVFSFWGMGMAFYFNLIGMEG
NYAHLSLVFLAVVLMALIMSGFVVLVYGISKSVIETAGAIGVYTAPSFAFAGVTYPQNNMETFGSFWSHCLPISHFMKFF
LQEAYYKTDFAESLRSLIPLFVFLIFLALGLLVFYFSFKKDRVNA
>Mature_365_residues
MFRLISAWVLQDKFLFIVCFILPFCLGILGKQIFEQEIPRQLPIVVVDLDKTTTSVQVAFELGTTSALKIKYQVTSLLEA
KRLLNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYVLVGKTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQA
VPIRLELHALYNEENNYTQYLLSVMLPCMWLILISIGMLNFIQKISNMRELFISIAANVFVFSFWGMGMAFYFNLIGMEG
NYAHLSLVFLAVVLMALIMSGFVVLVYGISKSVIETAGAIGVYTAPSFAFAGVTYPQNNMETFGSFWSHCLPISHFMKFF
LQEAYYKTDFAESLRSLIPLFVFLIFLALGLLVFYFSFKKDRVNA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41261; Mature: 41261

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLISAWVLQDKFLFIVCFILPFCLGILGKQIFEQEIPRQLPIVVVDLDKTTTSVQVAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEE
ELGTTSALKIKYQVTSLLEAKRLLNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYV
EECCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCEECCCEEECCCEE
LVGKTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQAVPIRLELHALYNEENNYTQY
EECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHEEEEEEEEEEECCCCCHHHHH
LLSVMLPCMWLILISIGMLNFIQKISNMRELFISIAANVFVFSFWGMGMAFYFNLIGMEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NYAHLSLVFLAVVLMALIMSGFVVLVYGISKSVIETAGAIGVYTAPSFAFAGVTYPQNNM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCCH
ETFGSFWSHCLPISHFMKFFLQEAYYKTDFAESLRSLIPLFVFLIFLALGLLVFYFSFKK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRVNA
HCCCC
>Mature Secondary Structure
MFRLISAWVLQDKFLFIVCFILPFCLGILGKQIFEQEIPRQLPIVVVDLDKTTTSVQVAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEE
ELGTTSALKIKYQVTSLLEAKRLLNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYV
EECCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCEECCCEEECCCEE
LVGKTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQAVPIRLELHALYNEENNYTQY
EECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHEEEEEEEEEEECCCCCHHHHH
LLSVMLPCMWLILISIGMLNFIQKISNMRELFISIAANVFVFSFWGMGMAFYFNLIGMEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NYAHLSLVFLAVVLMALIMSGFVVLVYGISKSVIETAGAIGVYTAPSFAFAGVTYPQNNM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCCH
ETFGSFWSHCLPISHFMKFFLQEAYYKTDFAESLRSLIPLFVFLIFLALGLLVFYFSFKK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRVNA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA