| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is htpG
Identifier: 109948000
GI number: 109948000
Start: 1311605
End: 1313470
Strand: Reverse
Name: htpG
Synonym: Hac_1509
Alternate gene names: 109948000
Gene position: 1313470-1311605 (Counterclockwise)
Preceding gene: 109948003
Following gene: 109947997
Centisome position: 84.53
GC content: 35.64
Gene sequence:
>1866_bases ATGTCTAATCAAGAATACACCTTTCAAACTGAAATCAACCAACTTTTGGATTTGATGATCCACTCTATGTATTCTAATAA AGAGATTTTTTTAAGGGAGTTGATTTCTAATGCGAGCGACGCTTTGGATAAGCTCAATTATTTAATGCTAACCGATGAAA AATTAAAAGGGCTAAAGATCACGCCTAGCATTCATTTGAGTTTTGATAGCCAGAAAAAAACCTTAACCATTAAAGATAAT GGTATAGGCATGGATAAAAACGATTTGATCGAGCATTTAGGCACGATCGCTAAATCAGGCACTAAAAGTTTTTTAAGCGC TTTGAGTGGGGATAAGAAAAAAGATAGCGCTTTAATTGGTCAATTTGGCGTGGGCTTTTATTCAGCGTTTATGGTAGCGG GTAAAATTGTCGTTCAAACCAAAAAAGTAACTAGCGAGCAAGCTTATGCATGGGTGAGCGATGGTAAGGGTAAGTTTGAA ATCAATGAATGTATCAAAGATGAGCAAGGCACAGAAATCACCCTCTTTTTAAAAGATGAAGACGCTAATTTTGCGAGCCG TTGGGAGATTGATAGCATTGTTAAAAAGTATTCTGAGCATATCCCTTTCCCTATTTTTTTAACTTACACCGATACGAAAA TGGAAGGCGAAGGGGATCACAAAAAAGAAGTTAAAGAAGAAAAATGCGAGCAAATCAATCAAGCGAGCGCTTTATGGAAA ATGAATAAAAGCGAATTGAAAGACAAAGATTACAAAGAGTTTTATAAATCATTTGCACATGATAACAGTGAGCCTTTGAG CTATATCCACAATAAAGTGGAAGGCTCTTTAGAATACACAACGCTTTTTTACATCCCTAGCGTTGCACCCTTTGACATGT TTAGGGTGGATTATAAAAGTGGGGTCAAACTCTATGTTAAAAGGGTGTTTATCACTGATGATGACAAAGAATTACTGCCG TCTTATTTGAGGTTTATTAAAGGCGTGATTGATAGCGAAGATCTACCCTTGAATGTGAGCCGCGAAATCTTACAGCAAAA CAAGATTTTAGCCAATATCCGTTCTGCTTCAGTGAAAAAGATTTTAGGCGAGATTGAAAAATTAAGCAAGGATAATGAAA ATTACCATAAATTCTATGAGCCTTTTGGGAAAGTGTTAAAAGAAGGCTTGTATGGGGATTTTGAAAACAAAGAAAAACTA TTAGAATTATTAAGATTCTATTCTAAAGACAAAGAAAAATTGATTTCTTTAAAAGAATACAAAGAGAATCTAAAAGAAAA TCAAAAAAGCATTTACTACCTTTTAGGCGAAAACCTGGATTTACTAAAGGCGTCCCCAATTTTAGAAAAATACGCTCAAA AAGGCTATGATGTCTTGTTATTGAGCGATGAAATTGATGCGTTTGTGATGCCAAGCGTGAATGAATACGACAAAATGCCT TTTAGAGACGCTAGCCATAGCGAGAGCTTGAAAGAGCTTGGTTTAGAAGAAATTAATGATGAGGTGAAAAACCAGTTTAA AGATTTAATAAAGGCGTTTGAAGAAAATCTTAAAGATGAGATTAAGGGCGTGGAGCTTTCTAGCCATCTCACTTCAGCGG TGGCTTTAATAGGTGATGAACAAAATGCGATGATGGCTAATTTGATGCGTCAAATGGGTCAAAATATGCCTGAAAGCAAA AAAACTTTGGAATTAAACCCTAACCATGCGATTTTACAAAAACTCTTAAAATGCGAAGATAAAGAGCAGATGAGCGCTTT TATTTGGTTGCTTTATGATGGGGCAAAGCTTTTAGAAAAAGGGGCTTTAAAAGATGCCAAAAGCTTTAATGAGCGTTTAA ACAGCGTGCTATTGAAAGCGTTGTAG
Upstream 100 bases:
>100_bases TTATCCGGCTTTTGCAAAAGATAGATCCACAGAATGCAAGCAGCTATTTAAACGCGCTTTTTATTGTATAATCTTAAAAA TTTTATTTAAGGAAAAGTCA
Downstream 100 bases:
>100_bases AGGTAAAAACTCTTTTTTAGGGGTTTAAACAGAACTGCTTTAAACCCTTTAAACACAAGCCTTTAGCGTTTGAAATGAAT GAGTGCGATAAAAGCCTTAA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MSNQEYTFQTEINQLLDLMIHSMYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLKITPSIHLSFDSQKKTLTIKDN GIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVAGKIVVQTKKVTSEQAYAWVSDGKGKFE INECIKDEQGTEITLFLKDEDANFASRWEIDSIVKKYSEHIPFPIFLTYTDTKMEGEGDHKKEVKEEKCEQINQASALWK MNKSELKDKDYKEFYKSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSVAPFDMFRVDYKSGVKLYVKRVFITDDDKELLP SYLRFIKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILGEIEKLSKDNENYHKFYEPFGKVLKEGLYGDFENKEKL LELLRFYSKDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYDKMP FRDASHSESLKELGLEEINDEVKNQFKDLIKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANLMRQMGQNMPESK KTLELNPNHAILQKLLKCEDKEQMSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL
Sequences:
>Translated_621_residues MSNQEYTFQTEINQLLDLMIHSMYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLKITPSIHLSFDSQKKTLTIKDN GIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVAGKIVVQTKKVTSEQAYAWVSDGKGKFE INECIKDEQGTEITLFLKDEDANFASRWEIDSIVKKYSEHIPFPIFLTYTDTKMEGEGDHKKEVKEEKCEQINQASALWK MNKSELKDKDYKEFYKSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSVAPFDMFRVDYKSGVKLYVKRVFITDDDKELLP SYLRFIKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILGEIEKLSKDNENYHKFYEPFGKVLKEGLYGDFENKEKL LELLRFYSKDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYDKMP FRDASHSESLKELGLEEINDEVKNQFKDLIKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANLMRQMGQNMPESK KTLELNPNHAILQKLLKCEDKEQMSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL >Mature_620_residues SNQEYTFQTEINQLLDLMIHSMYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLKITPSIHLSFDSQKKTLTIKDNG IGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVAGKIVVQTKKVTSEQAYAWVSDGKGKFEI NECIKDEQGTEITLFLKDEDANFASRWEIDSIVKKYSEHIPFPIFLTYTDTKMEGEGDHKKEVKEEKCEQINQASALWKM NKSELKDKDYKEFYKSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSVAPFDMFRVDYKSGVKLYVKRVFITDDDKELLPS YLRFIKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILGEIEKLSKDNENYHKFYEPFGKVLKEGLYGDFENKEKLL ELLRFYSKDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYDKMPF RDASHSESLKELGLEEINDEVKNQFKDLIKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANLMRQMGQNMPESKK TLELNPNHAILQKLLKCEDKEQMSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI4507677, Length=689, Percent_Identity=34.5428156748911, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI155722983, Length=654, Percent_Identity=33.9449541284404, Blast_Score=348, Evalue=6e-96, Organism=Homo sapiens, GI154146191, Length=401, Percent_Identity=37.4064837905237, Blast_Score=239, Evalue=6e-63, Organism=Homo sapiens, GI20149594, Length=403, Percent_Identity=36.2282878411911, Blast_Score=238, Evalue=2e-62, Organism=Homo sapiens, GI153792590, Length=401, Percent_Identity=37.4064837905237, Blast_Score=237, Evalue=2e-62, Organism=Escherichia coli, GI1786679, Length=639, Percent_Identity=46.1658841940532, Blast_Score=548, Evalue=1e-157, Organism=Caenorhabditis elegans, GI17559162, Length=662, Percent_Identity=38.9728096676737, Blast_Score=405, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17542208, Length=677, Percent_Identity=37.0753323485968, Blast_Score=382, Evalue=1e-106, Organism=Caenorhabditis elegans, GI115535205, Length=645, Percent_Identity=32.7131782945736, Blast_Score=297, Evalue=1e-80, Organism=Caenorhabditis elegans, GI115535167, Length=437, Percent_Identity=36.6132723112128, Blast_Score=259, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6323840, Length=687, Percent_Identity=37.7001455604076, Blast_Score=404, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6325016, Length=680, Percent_Identity=37.9411764705882, Blast_Score=399, Evalue=1e-111, Organism=Drosophila melanogaster, GI17647529, Length=650, Percent_Identity=37.0769230769231, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI21357739, Length=632, Percent_Identity=37.8164556962025, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI24586016, Length=645, Percent_Identity=32.8682170542636, Blast_Score=314, Evalue=1e-85,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_HELAH (Q17VU7)
Other databases:
- EMBL: AM260522 - RefSeq: YP_665228.1 - ProteinModelPortal: Q17VU7 - STRING: Q17VU7 - GeneID: 4177543 - GenomeReviews: AM260522_GR - KEGG: hac:Hac_1509 - NMPDR: fig|382638.8.peg.1461 - eggNOG: COG0326 - HOGENOM: HBG631012 - OMA: KYIANAY - PhylomeDB: Q17VU7 - ProtClustDB: PRK05218 - BioCyc: HACI382638:HAC_1509-MONOMER - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 71286; Mature: 71155
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQEYTFQTEINQLLDLMIHSMYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLKI CCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE TPSIHLSFDSQKKTLTIKDNGIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIG CCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH QFGVGFYSAFMVAGKIVVQTKKVTSEQAYAWVSDGKGKFEINECIKDEQGTEITLFLKDE HHHHHHHHHHHHHHHHHEEEHHHCCHHHEEEECCCCCCEEHHHHHCCCCCCEEEEEEECC DANFASRWEIDSIVKKYSEHIPFPIFLTYTDTKMEGEGDHKKEVKEEKCEQINQASALWK CCCCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MNKSELKDKDYKEFYKSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSVAPFDMFRVDYKS CCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHC GVKLYVKRVFITDDDKELLPSYLRFIKGVIDSEDLPLNVSREILQQNKILANIRSASVKK CCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILGEIEKLSKDNENYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYSKDKEKLISLKEY HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH KENLKENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYDKMP HHHHHHCCCEEEEEECCCCCHHHCCHHHHHHHHCCCEEEEEECCCCEEECCCCCHHHCCC FRDASHSESLKELGLEEINDEVKNQFKDLIKAFEENLKDEIKGVELSSHLTSAVALIGDE CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC QNAMMANLMRQMGQNMPESKKTLELNPNHAILQKLLKCEDKEQMSAFIWLLYDGAKLLEK CHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHEECCHHHHHH GALKDAKSFNERLNSVLLKAL HCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNQEYTFQTEINQLLDLMIHSMYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLKI CCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE TPSIHLSFDSQKKTLTIKDNGIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIG CCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH QFGVGFYSAFMVAGKIVVQTKKVTSEQAYAWVSDGKGKFEINECIKDEQGTEITLFLKDE HHHHHHHHHHHHHHHHHEEEHHHCCHHHEEEECCCCCCEEHHHHHCCCCCCEEEEEEECC DANFASRWEIDSIVKKYSEHIPFPIFLTYTDTKMEGEGDHKKEVKEEKCEQINQASALWK CCCCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MNKSELKDKDYKEFYKSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSVAPFDMFRVDYKS CCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHC GVKLYVKRVFITDDDKELLPSYLRFIKGVIDSEDLPLNVSREILQQNKILANIRSASVKK CCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILGEIEKLSKDNENYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYSKDKEKLISLKEY HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH KENLKENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYDKMP HHHHHHCCCEEEEEECCCCCHHHCCHHHHHHHHCCCEEEEEECCCCEEECCCCCHHHCCC FRDASHSESLKELGLEEINDEVKNQFKDLIKAFEENLKDEIKGVELSSHLTSAVALIGDE CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC QNAMMANLMRQMGQNMPESKKTLELNPNHAILQKLLKCEDKEQMSAFIWLLYDGAKLLEK CHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHEECCHHHHHH GALKDAKSFNERLNSVLLKAL HCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA