| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is mboIBM [H]
Identifier: 109948003
GI number: 109948003
Start: 1314237
End: 1315073
Strand: Reverse
Name: mboIBM [H]
Synonym: Hac_1512
Alternate gene names: 109948003
Gene position: 1315073-1314237 (Counterclockwise)
Preceding gene: 109948004
Following gene: 109948000
Centisome position: 84.63
GC content: 37.63
Gene sequence:
>837_bases TTGCCTTATTCTAATCAAACCCCACACTCCGTTTTTGAAAGCACGGACAAGCTTTTCACTCTCTATCAAGGGGATTGCAA TGAGGTTTTGTCTCTATTTGAAAATACTTTTGATTTGATTTTTGCCGATCCGCCTTATTTCCTTTCTAATGATGGCTTAA GCATACAGAGCGGTAAAATTGTGAGCGTCAATAAAGGCGATTGGGATAAAGAAGAGAGGATTAATGATATTGATGAGTTT AATTATCAGTGGATAAACAGCGCTAAAAAAGCTCTAAAAAATACAGGAAGTCTTTTAATCAGCGGGACTTATCACAATCT TTTTTCTTTGGGGCGTATTTTACAAAAACTGGATTTTAAGATTTTAAACCTCATCACTTGGCAAAAAACCAACCCTCCCC CTAATTTTAGTTGCCGTTATTTGACGCATTCAGCCGAGCAAATCATTTGGGCGAGAAAAAGCCACAAACACAAGCATGTT TTTAACTATGAGGTTTTAAAAAAGATCAATAGCGATAAACAAATGCGTGATGTATGGAGCTTCCCGGCTATCGCACCTTG GGAAAAAACAAACGGCAAGCACCCCACTCAAAAACCGCTTGCGTTACTTGTGCGCTTGCTTTTAATGGCGAGTAATGAAA ATTCTCTCATTGGCGATCCTTTTAGCGGGAGTTCCACCACAGGTATTGCGGCCAATCTTTTGAAGAGAAAATTTATCGGT ATAGAAAAAGAAAGCGAATTTATTAAAATGTCAATAAATAGAAAAATGGAATTAGACGCTCGCTATAAAGAAATCCGATC CAAAATCAAAGATTTGAATCCAATAGACCCCTTTTGA
Upstream 100 bases:
>100_bases TGGCGATGTTTGGTTTTGATACAGTGGAAGGTGATGAAAAGATGCAAAAATACATTGAAGACAAAGGCATTAAAGCAGAG TAGGGGGAGTAAAAAGCCAT
Downstream 100 bases:
>100_bases GTGGGCTTAAGCGTTATACTTTTCGGATTTTATCTCAAAATGAGATTCTATTTTCACCCAATCCTCACAAAGGATATTTT CATGCCCAAAAAGCCAGTGT
Product: DNA methyltransferase
Products: NA
Alternate protein names: M.MboIB; Adenine-specific methyltransferase MboIB; M.MboI C [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MPYSNQTPHSVFESTDKLFTLYQGDCNEVLSLFENTFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKEERINDIDEF NYQWINSAKKALKNTGSLLISGTYHNLFSLGRILQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSHKHKHV FNYEVLKKINSDKQMRDVWSFPAIAPWEKTNGKHPTQKPLALLVRLLLMASNENSLIGDPFSGSSTTGIAANLLKRKFIG IEKESEFIKMSINRKMELDARYKEIRSKIKDLNPIDPF
Sequences:
>Translated_278_residues MPYSNQTPHSVFESTDKLFTLYQGDCNEVLSLFENTFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKEERINDIDEF NYQWINSAKKALKNTGSLLISGTYHNLFSLGRILQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSHKHKHV FNYEVLKKINSDKQMRDVWSFPAIAPWEKTNGKHPTQKPLALLVRLLLMASNENSLIGDPFSGSSTTGIAANLLKRKFIG IEKESEFIKMSINRKMELDARYKEIRSKIKDLNPIDPF >Mature_277_residues PYSNQTPHSVFESTDKLFTLYQGDCNEVLSLFENTFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKEERINDIDEFN YQWINSAKKALKNTGSLLISGTYHNLFSLGRILQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSHKHKHVF NYEVLKKINSDKQMRDVWSFPAIAPWEKTNGKHPTQKPLALLVRLLLMASNENSLIGDPFSGSSTTGIAANLLKRKFIGI EKESEFIKMSINRKMELDARYKEIRSKIKDLNPIDPF
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MboI endonuclease [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=264, Percent_Identity=29.9242424242424, Blast_Score=94, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32034; Mature: 31903
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSNQTPHSVFESTDKLFTLYQGDCNEVLSLFENTFDLIFADPPYFLSNDGLSIQSGKI CCCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHCCCEEEECCCCCEECCCCCEECCCEE VSVNKGDWDKEERINDIDEFNYQWINSAKKALKNTGSLLISGTYHNLFSLGRILQKLDFK EEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHH ILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSHKHKHVFNYEVLKKINSDKQMRDVWS HHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHC FPAIAPWEKTNGKHPTQKPLALLVRLLLMASNENSLIGDPFSGSSTTGIAANLLKRKFIG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHCC IEKESEFIKMSINRKMELDARYKEIRSKIKDLNPIDPF CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PYSNQTPHSVFESTDKLFTLYQGDCNEVLSLFENTFDLIFADPPYFLSNDGLSIQSGKI CCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHCCCEEEECCCCCEECCCCCEECCCEE VSVNKGDWDKEERINDIDEFNYQWINSAKKALKNTGSLLISGTYHNLFSLGRILQKLDFK EEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHH ILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSHKHKHVFNYEVLKKINSDKQMRDVWS HHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHC FPAIAPWEKTNGKHPTQKPLALLVRLLLMASNENSLIGDPFSGSSTTGIAANLLKRKFIG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHCC IEKESEFIKMSINRKMELDARYKEIRSKIKDLNPIDPF CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8506128 [H]