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The map label for this gene is hpaA [H]

Identifier: 109947467

GI number: 109947467

Start: 805029

End: 805811

Strand: Reverse

Name: hpaA [H]

Synonym: Hac_0919

Alternate gene names: 109947467

Gene position: 805811-805029 (Counterclockwise)

Preceding gene: 109947468

Following gene: 109947466

Centisome position: 51.86

GC content: 38.19

Gene sequence:

>783_bases
ATGGAAAAAAACCGCTGTTTTAAAAATTTTGCGTGGAAAAAATGTCTTTTAGGTACGAGTGTGGTGGCGTTACTAGTAGG
GTGTAGTCCTAATATTATTGAAACCAATAATGTCGCTTTGAAATTGAATTACCAATCCACTAGAACTAAAATGCAAGCGT
TAGATGAAAACATTTTGCTCTTAAAACCGGCTTTTCAGTATAGCGATAATGTGGCGAAAGAGTATGAAAACAAGTTCAAA
AACCAGATTGCACTAAAGGTTGAAGAAATCTTGCAAAATCAAGGCTACAAGGTCATTAGCGTGGATAGTAGCGATAAAGA
CGATCTCTCTTTTGCACAGAAAAAAGAAGGGTATTTGACTCTTTCATTGAGTGGGGAGATTGTTTTACGACCGGATCCTA
AAAGAACCACGCAGAAAAAATCGGAACCTGGGTTATTATTTTCCACCGGTTTGGACAAAATGCAAGGGGTTTTGATTTCA
GCCGGTTTTATCAAGCTCACGATCATGGAGCCTATCAGTGGGGAAACTTTGGATTCTTTCACGATGGATTTGAGCGAGTT
GGATATTCAAGAAAAATTCTTAAGAACCACCCATTCAAGCCATACTGGGGGGTTAGCGAGCACGATGGTTAAGGGCTTGG
ATAATTCTAATGACGCGATCAAGAGCGCTTTGAATAAGATGTTTGTGGATATTATGCAAAAAATAGACAAAAAACTCACT
CAAGCGAATTTAGAATCTTACAAGCAAGACGCTAAAGAACTAAAAGGTAAAAGAAACCGATAA

Upstream 100 bases:

>100_bases
TTTTGGCATGGCTTGTAAGCTTGAAAATGTTAGGGTAAAATAACTTTTTAATAAAAGCATGTCTGTTATTGATGGAAGTT
AAATATTAAGGATAGAATTG

Downstream 100 bases:

>100_bases
AAACAATCAAAAAAAGTTAAGTCAAAGAACGCTTGGAAAGGTTGCTTAAGAAGGGGGTTTCGGCGTTCTTTTTGGGTGCG
AGTTTGAACGCTAATGATTG

Product: neuraminyllactose-binding hemagglutinin precursor

Products: NA

Alternate protein names: N-acetylneuraminyllactose-binding fibrillar hemagglutinin receptor-binding subunit; NLBH [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MEKNRCFKNFAWKKCLLGTSVVALLVGCSPNIIETNNVALKLNYQSTRTKMQALDENILLLKPAFQYSDNVAKEYENKFK
NQIALKVEEILQNQGYKVISVDSSDKDDLSFAQKKEGYLTLSLSGEIVLRPDPKRTTQKKSEPGLLFSTGLDKMQGVLIS
AGFIKLTIMEPISGETLDSFTMDLSELDIQEKFLRTTHSSHTGGLASTMVKGLDNSNDAIKSALNKMFVDIMQKIDKKLT
QANLESYKQDAKELKGKRNR

Sequences:

>Translated_260_residues
MEKNRCFKNFAWKKCLLGTSVVALLVGCSPNIIETNNVALKLNYQSTRTKMQALDENILLLKPAFQYSDNVAKEYENKFK
NQIALKVEEILQNQGYKVISVDSSDKDDLSFAQKKEGYLTLSLSGEIVLRPDPKRTTQKKSEPGLLFSTGLDKMQGVLIS
AGFIKLTIMEPISGETLDSFTMDLSELDIQEKFLRTTHSSHTGGLASTMVKGLDNSNDAIKSALNKMFVDIMQKIDKKLT
QANLESYKQDAKELKGKRNR
>Mature_260_residues
MEKNRCFKNFAWKKCLLGTSVVALLVGCSPNIIETNNVALKLNYQSTRTKMQALDENILLLKPAFQYSDNVAKEYENKFK
NQIALKVEEILQNQGYKVISVDSSDKDDLSFAQKKEGYLTLSLSGEIVLRPDPKRTTQKKSEPGLLFSTGLDKMQGVLIS
AGFIKLTIMEPISGETLDSFTMDLSELDIQEKFLRTTHSSHTGGLASTMVKGLDNSNDAIKSALNKMFVDIMQKIDKKLT
QANLESYKQDAKELKGKRNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007876 [H]

Pfam domain/function: PF05211 NLBH [H]

EC number: NA

Molecular weight: Translated: 29172; Mature: 29172

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNRCFKNFAWKKCLLGTSVVALLVGCSPNIIETNNVALKLNYQSTRTKMQALDENILL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECHHHHHHHHHHCCCEEE
LKPAFQYSDNVAKEYENKFKNQIALKVEEILQNQGYKVISVDSSDKDDLSFAQKKEGYLT
EECCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEE
LSLSGEIVLRPDPKRTTQKKSEPGLLFSTGLDKMQGVLISAGFIKLTIMEPISGETLDSF
EEECCEEEECCCCCHHHCCCCCCCEEEECCHHHHHHHEEECCEEEEEEECCCCCCCHHHH
TMDLSELDIQEKFLRTTHSSHTGGLASTMVKGLDNSNDAIKSALNKMFVDIMQKIDKKLT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QANLESYKQDAKELKGKRNR
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEKNRCFKNFAWKKCLLGTSVVALLVGCSPNIIETNNVALKLNYQSTRTKMQALDENILL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECHHHHHHHHHHCCCEEE
LKPAFQYSDNVAKEYENKFKNQIALKVEEILQNQGYKVISVDSSDKDDLSFAQKKEGYLT
EECCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEE
LSLSGEIVLRPDPKRTTQKKSEPGLLFSTGLDKMQGVLISAGFIKLTIMEPISGETLDSF
EEECCEEEECCCCCHHHCCCCCCCEEEECCHHHHHHHEEECCEEEEEEECCCCCCCHHHH
TMDLSELDIQEKFLRTTHSSHTGGLASTMVKGLDNSNDAIKSALNKMFVDIMQKIDKKLT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QANLESYKQDAKELKGKRNR
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678592; 7557486 [H]