Click here to switch to the map view.

The map label for this gene is omp10

Identifier: 109947466

GI number: 109947466

Start: 804163

End: 804996

Strand: Reverse

Name: omp10

Synonym: Hac_0918

Alternate gene names: NA

Gene position: 804996-804163 (Counterclockwise)

Preceding gene: 109947467

Following gene: 109947465

Centisome position: 51.8

GC content: 36.45

Gene sequence:

>834_bases
TTGGAAAGGTTGCTTAAGAAGGGGGTTTCGGCGTTCTTTTTGGGTGCGAGTTTGAACGCTAATGATTGGACTTACACGAT
TGTCAAAAAAGAAGAATTAGGGCATAAGCGATTTTTAAAAAAGAAATGTTTGAAAAATACGGCACGCCACCCATGTTTTG
CTAGACCCAAAAGGGCGAAGAGAAAACCTCTTAATTTAGATAAAAATTCCTACTATTATGGCACTAGCGTGGTGCAAATG
TCATGGTTAGAGAGTAAAGAAACCTTTAAAAACCATTCAGAGTATAAAAATATTCCTTTTGCTGAAGTCAGTTTGATCTT
TGGTTACAAGCATTTTTTCCCTAAAAAAGAGCACTATGGGTTTCGTTATTACGCTTTTTTGGATTACGCTTATGGGTTTT
TGCCTAAAAGTAAAAGCGATTTCAAGGCGAGTTTGAGAGAGAGTTTGCAAATCCCTAAAAGCTATCAAAACAAATTGCAA
AAAAAAGAGACTTTTATCAACACCCTTATTTATGGCATGGGGGCGGATATTGTATATAAAAGGGCTTTTGGGACGCTGAT
TTTAGGGGTAAATCTCGTGGGGGAAACCTGGTTTTATGAAACAAATATCTTTAAACAATGGGCTAAAAACCCTCTAAATA
CTTACCACCCCAACATGTTTCAAGTGATGTTAAATGCAGGGTATCGTTACCGCTTTTCAAGGCATAAAAACTGGGCAATA
GAATTGGGCACACGCATCCCTTTTTTAATTAATCGTTATTTTAAGACCCCTTTATACTCCCTTTATTTTAAGCGTAACCT
TTCGATTTATCTCACTTCAACTTATGATTTTTAG

Upstream 100 bases:

>100_bases
TCACTCAAGCGAATTTAGAATCTTACAAGCAAGACGCTAAAGAACTAAAAGGTAAAAGAAACCGATAAAAACAATCAAAA
AAAGTTAAGTCAAAGAACGC

Downstream 100 bases:

>100_bases
CCTAGTTTTTTAAAATCCTTTGAAAACTAGAATTAAAAGCGCTTTTTATCAACCGAAATTCAAACAAATTAAGCTATAAT
GCCTATTTAATTTTTTAACC

Product: outer membrane protein 10

Products: NA

Alternate protein names: Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorG

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MERLLKKGVSAFFLGASLNANDWTYTIVKKEELGHKRFLKKKCLKNTARHPCFARPKRAKRKPLNLDKNSYYYGTSVVQM
SWLESKETFKNHSEYKNIPFAEVSLIFGYKHFFPKKEHYGFRYYAFLDYAYGFLPKSKSDFKASLRESLQIPKSYQNKLQ
KKETFINTLIYGMGADIVYKRAFGTLILGVNLVGETWFYETNIFKQWAKNPLNTYHPNMFQVMLNAGYRYRFSRHKNWAI
ELGTRIPFLINRYFKTPLYSLYFKRNLSIYLTSTYDF

Sequences:

>Translated_277_residues
MERLLKKGVSAFFLGASLNANDWTYTIVKKEELGHKRFLKKKCLKNTARHPCFARPKRAKRKPLNLDKNSYYYGTSVVQM
SWLESKETFKNHSEYKNIPFAEVSLIFGYKHFFPKKEHYGFRYYAFLDYAYGFLPKSKSDFKASLRESLQIPKSYQNKLQ
KKETFINTLIYGMGADIVYKRAFGTLILGVNLVGETWFYETNIFKQWAKNPLNTYHPNMFQVMLNAGYRYRFSRHKNWAI
ELGTRIPFLINRYFKTPLYSLYFKRNLSIYLTSTYDF
>Mature_277_residues
MERLLKKGVSAFFLGASLNANDWTYTIVKKEELGHKRFLKKKCLKNTARHPCFARPKRAKRKPLNLDKNSYYYGTSVVQM
SWLESKETFKNHSEYKNIPFAEVSLIFGYKHFFPKKEHYGFRYYAFLDYAYGFLPKSKSDFKASLRESLQIPKSYQNKLQ
KKETFINTLIYGMGADIVYKRAFGTLILGVNLVGETWFYETNIFKQWAKNPLNTYHPNMFQVMLNAGYRYRFSRHKNWAI
ELGTRIPFLINRYFKTPLYSLYFKRNLSIYLTSTYDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33008; Mature: 33008

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLLKKGVSAFFLGASLNANDWTYTIVKKEELGHKRFLKKKCLKNTARHPCFARPKRAK
CHHHHHCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
RKPLNLDKNSYYYGTSVVQMSWLESKETFKNHSEYKNIPFAEVSLIFGYKHFFPKKEHYG
CCCCCCCCCCEEECCHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
FRYYAFLDYAYGFLPKSKSDFKASLRESLQIPKSYQNKLQKKETFINTLIYGMGADIVYK
EEEEEHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RAFGTLILGVNLVGETWFYETNIFKQWAKNPLNTYHPNMFQVMLNAGYRYRFSRHKNWAI
HHHHHHEEEEEECCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEECCCCCEEE
ELGTRIPFLINRYFKTPLYSLYFKRNLSIYLTSTYDF
EECCCCHHHHHHHHHCHHHHHHHHCCCEEEEEEECCC
>Mature Secondary Structure
MERLLKKGVSAFFLGASLNANDWTYTIVKKEELGHKRFLKKKCLKNTARHPCFARPKRAK
CHHHHHCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
RKPLNLDKNSYYYGTSVVQMSWLESKETFKNHSEYKNIPFAEVSLIFGYKHFFPKKEHYG
CCCCCCCCCCEEECCHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
FRYYAFLDYAYGFLPKSKSDFKASLRESLQIPKSYQNKLQKKETFINTLIYGMGADIVYK
EEEEEHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RAFGTLILGVNLVGETWFYETNIFKQWAKNPLNTYHPNMFQVMLNAGYRYRFSRHKNWAI
HHHHHHEEEEEECCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEECCCCCEEE
ELGTRIPFLINRYFKTPLYSLYFKRNLSIYLTSTYDF
EECCCCHHHHHHHHHCHHHHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA