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The map label for this gene is nudK [H]

Identifier: 109947449

GI number: 109947449

Start: 784626

End: 785261

Strand: Reverse

Name: nudK [H]

Synonym: Hac_0900

Alternate gene names: 109947449

Gene position: 785261-784626 (Counterclockwise)

Preceding gene: 109947450

Following gene: 109947448

Centisome position: 50.53

GC content: 35.69

Gene sequence:

>636_bases
ATGTCTTATTTTAAAAATATTCCCAGCCAACAATCTTTGATCCATTATGCTAGCGTGTCTTTAGAGCCTTGTTCTGGCTC
TCATTATATAGAATTAAAACGCATGCATTATAATGAAGAGAATATAGAAAAATCATGGGATATTATCAAATCTTTAGACA
GCGTGGCTATTTTGCTTTATGAAAAAGAATCCGATTGTTTTGTGATTGTGAAGCAATTTCGCCCGGCCATTTATGCACGC
CATTTTCATTTTAAGCATGAGATTGACGGATACACGCATGAATTGTGTGCAGGGCTTGTGGATAAAGCCAATAAGAGTTT
AGAAGAAATCGCTTGCGAAGAAGTGTTAGAAGAATGCGGTTATGAAATTAGCCCTAAAAATTTAGAAAAAATAGGCCAGT
TTTATAGCGCGACTGGGTTAAGCGGGAGTTTGCAAACCATTTATTACGCTGAAGTGCACGAGAGTTTGAGGGTTTCAAAA
GGTGGGGGGATTGATGCAGAAAAGATTGAAGTGTTGTTTTTAAAAAGATCAAAAGCCCTTGATTTTATAGCGGATTTTCA
ATACGCTAAAACCACCGGATTGTCTTTGGCCATTTTATGGCATCTAAAAAATTTTAAAAATACTAAAAATGTTTAA

Upstream 100 bases:

>100_bases
TTTTTTTAGAAAAAGCCAGACGATCTAAACAAAAATTAGAAGAACTTTTTAAAACCCATTCTTTTGAAACAAATCCATTT
TATCTTTTAGAGGGCTTTTA

Downstream 100 bases:

>100_bases
AAGGAATTGTATGTTAAGGCGTTTGATAGGACTTTTTTTAGCTAGTTTTATAAGCTTGCAATCAGCCTCTTGGCAAGAAC
CCTTAAGAGTGAGCGTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSYFKNIPSQQSLIHYASVSLEPCSGSHYIELKRMHYNEENIEKSWDIIKSLDSVAILLYEKESDCFVIVKQFRPAIYAR
HFHFKHEIDGYTHELCAGLVDKANKSLEEIACEEVLEECGYEISPKNLEKIGQFYSATGLSGSLQTIYYAEVHESLRVSK
GGGIDAEKIEVLFLKRSKALDFIADFQYAKTTGLSLAILWHLKNFKNTKNV

Sequences:

>Translated_211_residues
MSYFKNIPSQQSLIHYASVSLEPCSGSHYIELKRMHYNEENIEKSWDIIKSLDSVAILLYEKESDCFVIVKQFRPAIYAR
HFHFKHEIDGYTHELCAGLVDKANKSLEEIACEEVLEECGYEISPKNLEKIGQFYSATGLSGSLQTIYYAEVHESLRVSK
GGGIDAEKIEVLFLKRSKALDFIADFQYAKTTGLSLAILWHLKNFKNTKNV
>Mature_210_residues
SYFKNIPSQQSLIHYASVSLEPCSGSHYIELKRMHYNEENIEKSWDIIKSLDSVAILLYEKESDCFVIVKQFRPAIYARH
FHFKHEIDGYTHELCAGLVDKANKSLEEIACEEVLEECGYEISPKNLEKIGQFYSATGLSGSLQTIYYAEVHESLRVSKG
GGIDAEKIEVLFLKRSKALDFIADFQYAKTTGLSLAILWHLKNFKNTKNV

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI37594467, Length=203, Percent_Identity=38.9162561576355, Blast_Score=151, Evalue=4e-37,
Organism=Escherichia coli, GI1788810, Length=131, Percent_Identity=33.587786259542, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17558808, Length=153, Percent_Identity=39.2156862745098, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24650557, Length=192, Percent_Identity=39.5833333333333, Blast_Score=128, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 24127; Mature: 23996

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYFKNIPSQQSLIHYASVSLEPCSGSHYIELKRMHYNEENIEKSWDIIKSLDSVAILLY
CCCCCCCCCHHHHHHHHHCEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEE
EKESDCFVIVKQFRPAIYARHFHFKHEIDGYTHELCAGLVDKANKSLEEIACEEVLEECG
ECCCCEEEEHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YEISPKNLEKIGQFYSATGLSGSLQTIYYAEVHESLRVSKGGGIDAEKIEVLFLKRSKAL
CCCCHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHCCCCCCCCHHHEEEEEEECCHHH
DFIADFQYAKTTGLSLAILWHLKNFKNTKNV
HHHHHHHHHHHCCCEEEEEEEHHHCCCCCCC
>Mature Secondary Structure 
SYFKNIPSQQSLIHYASVSLEPCSGSHYIELKRMHYNEENIEKSWDIIKSLDSVAILLY
CCCCCCCCHHHHHHHHHCEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEE
EKESDCFVIVKQFRPAIYARHFHFKHEIDGYTHELCAGLVDKANKSLEEIACEEVLEECG
ECCCCEEEEHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YEISPKNLEKIGQFYSATGLSGSLQTIYYAEVHESLRVSKGGGIDAEKIEVLFLKRSKAL
CCCCHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHCCCCCCCCHHHEEEEEEECCHHH
DFIADFQYAKTTGLSLAILWHLKNFKNTKNV
HHHHHHHHHHHCCCEEEEEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA