Click here to switch to the map view.

The map label for this gene is pgbA [H]

Identifier: 109947448

GI number: 109947448

Start: 783368

End: 784615

Strand: Reverse

Name: pgbA [H]

Synonym: Hac_0899

Alternate gene names: 109947448

Gene position: 784615-783368 (Counterclockwise)

Preceding gene: 109947449

Following gene: 109947447

Centisome position: 50.49

GC content: 38.62

Gene sequence:

>1248_bases
ATGTTAAGGCGTTTGATAGGACTTTTTTTAGCTAGTTTTATAAGCTTGCAATCAGCCTCTTGGCAAGAACCCTTAAGAGT
GAGCGTGGATTTTGTAGATTTACCCAGAAAAATCATTCGTTTTCCTGCCCATGATTTGAAAGTGGGGGAGTTTGGTTTTG
TGGTGACAAAACTTTCAGATTATGAAGTTATCAACTCTGAAGTGATTATTATCGCTGTTGAAAATGGCGTCGCAACAGCG
AGATTTAAGGCGTTTGACTCCATAAAACAAAGCCATTTACCCACCCCAAGGATCATCGCTAAAAAAGGCGATTTAGTCTA
TTTTAGGCAATTCAATAACCAAGCGTTTTTGATCGCCCCCAATGATGCAATTTATGAGCAAATCAAGGCGGCAAATACGG
ATATTAATTTCATTAGCTCCGATTTGTTGGTGACTTTTTTGAATGGCTTTGATCCTAAAATGGCGAATTTGAGAAAAGCG
TGCAATATTTATAGCGTAGGGGTGATTTATTTAGTGACCACTAACACGCTCAATATTTTGAATTGCGAGAGCTTTGAGAT
TTTGGAAAAAAGAGCGTTGGATACAAGCGGTGTGACTAAAACTTCCACGCCGTTTTTTTCTAGAGTTGAGGGCATTGATG
CAGGCACGCTAGGGAAACTCTTTTCAGGCAGTAAATCTAGAAATTACTTCGCTTACTATGACGCTTTAGTGAAAAAAGAA
AAACGAAAAGAAGTAAGGATTGAAAAGAGAGAAGAAAAAGTTGATGCTAGAGAAAATAAGCAAGAAATCAAGCAAGAAGC
CATTAAACCCTCTCACAAAGAGCCTAAAAAAGCCAATCAAAACACAGAAAACGCTACCCAACAAAGCATCAAAGAAAATA
ACATCTCTCCAAAAGGCACGCAAGAAAGTAAAAACGCTCCCACTTTAGAAGAGAAAAACTACCAAAAAGCAGAGAAAAAG
CTTGATGCCACAGAAGAAAGGCGCCGCTTGAAAGATGAAAGGAAAAAAGCCAAAGCCGAACAAAGGGCGAGAGAATTTGA
ACAAAGAGCGAGAGAACATCAAGAAAAAGATGAAGCAGAACTTGAAGAAAGAAGAAAGGCTTTAGAGTCCAATTTGAAAG
ATGAAAGGAAAAAAGCCAAAGCCGAACAAAGGGCGAGAGAATTTGAACAAAGAGCGAGAGAACATCAAGAAAAAGATGAA
GCAGAACTTGAGGAAAGAAGAAAGGCTTTAGAGTCCAATAAGAAGTAG

Upstream 100 bases:

>100_bases
ATAGCGGATTTTCAATACGCTAAAACCACCGGATTGTCTTTGGCCATTTTATGGCATCTAAAAAATTTTAAAAATACTAA
AAATGTTTAAAAGGAATTGT

Downstream 100 bases:

>100_bases
ACCATGTTAGAGAAGCGACACCTTAAATATTTTAAAAATTTAGTAGGGGAAGAGGATTTCTTCACTGATTTAGCGCATTT
GAACGCTTATTGTTATGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MLRRLIGLFLASFISLQSASWQEPLRVSVDFVDLPRKIIRFPAHDLKVGEFGFVVTKLSDYEVINSEVIIIAVENGVATA
RFKAFDSIKQSHLPTPRIIAKKGDLVYFRQFNNQAFLIAPNDAIYEQIKAANTDINFISSDLLVTFLNGFDPKMANLRKA
CNIYSVGVIYLVTTNTLNILNCESFEILEKRALDTSGVTKTSTPFFSRVEGIDAGTLGKLFSGSKSRNYFAYYDALVKKE
KRKEVRIEKREEKVDARENKQEIKQEAIKPSHKEPKKANQNTENATQQSIKENNISPKGTQESKNAPTLEEKNYQKAEKK
LDATEERRRLKDERKKAKAEQRAREFEQRAREHQEKDEAELEERRKALESNLKDERKKAKAEQRAREFEQRAREHQEKDE
AELEERRKALESNKK

Sequences:

>Translated_415_residues
MLRRLIGLFLASFISLQSASWQEPLRVSVDFVDLPRKIIRFPAHDLKVGEFGFVVTKLSDYEVINSEVIIIAVENGVATA
RFKAFDSIKQSHLPTPRIIAKKGDLVYFRQFNNQAFLIAPNDAIYEQIKAANTDINFISSDLLVTFLNGFDPKMANLRKA
CNIYSVGVIYLVTTNTLNILNCESFEILEKRALDTSGVTKTSTPFFSRVEGIDAGTLGKLFSGSKSRNYFAYYDALVKKE
KRKEVRIEKREEKVDARENKQEIKQEAIKPSHKEPKKANQNTENATQQSIKENNISPKGTQESKNAPTLEEKNYQKAEKK
LDATEERRRLKDERKKAKAEQRAREFEQRAREHQEKDEAELEERRKALESNLKDERKKAKAEQRAREFEQRAREHQEKDE
AELEERRKALESNKK
>Mature_415_residues
MLRRLIGLFLASFISLQSASWQEPLRVSVDFVDLPRKIIRFPAHDLKVGEFGFVVTKLSDYEVINSEVIIIAVENGVATA
RFKAFDSIKQSHLPTPRIIAKKGDLVYFRQFNNQAFLIAPNDAIYEQIKAANTDINFISSDLLVTFLNGFDPKMANLRKA
CNIYSVGVIYLVTTNTLNILNCESFEILEKRALDTSGVTKTSTPFFSRVEGIDAGTLGKLFSGSKSRNYFAYYDALVKKE
KRKEVRIEKREEKVDARENKQEIKQEAIKPSHKEPKKANQNTENATQQSIKENNISPKGTQESKNAPTLEEKNYQKAEKK
LDATEERRRLKDERKKAKAEQRAREFEQRAREHQEKDEAELEERRKALESNLKDERKKAKAEQRAREFEQRAREHQEKDE
AELEERRKALESNKK

Specific function: Binds plasminogen, specifically, and in a concentration and lysine-dependent manner. Plasminogen is the precursor of plasmin, a serine protease that cleaves fibrin, fibronectin, laminin and vitronectin. Acquisition of plasminogen/plasmin could enable H.py

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell surface (Probable). Note=The plasminogen-binding region is localized on the surface the bacterium (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47934; Mature: 47934

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRLIGLFLASFISLQSASWQEPLRVSVDFVDLPRKIIRFPAHDLKVGEFGFVVTKLSD
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEECCHHEEEEECCC
YEVINSEVIIIAVENGVATARFKAFDSIKQSHLPTPRIIAKKGDLVYFRQFNNQAFLIAP
CEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCEEEECC
NDAIYEQIKAANTDINFISSDLLVTFLNGFDPKMANLRKACNIYSVGVIYLVTTNTLNIL
CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEEECCEEEE
NCESFEILEKRALDTSGVTKTSTPFFSRVEGIDAGTLGKLFSGSKSRNYFAYYDALVKKE
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
KRKEVRIEKREEKVDARENKQEIKQEAIKPSHKEPKKANQNTENATQQSIKENNISPKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCC
QESKNAPTLEEKNYQKAEKKLDATEERRRLKDERKKAKAEQRAREFEQRAREHQEKDEAE
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEERRKALESNLKDERKKAKAEQRAREFEQRAREHQEKDEAELEERRKALESNKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRRLIGLFLASFISLQSASWQEPLRVSVDFVDLPRKIIRFPAHDLKVGEFGFVVTKLSD
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEECCHHEEEEECCC
YEVINSEVIIIAVENGVATARFKAFDSIKQSHLPTPRIIAKKGDLVYFRQFNNQAFLIAP
CEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCEEEECC
NDAIYEQIKAANTDINFISSDLLVTFLNGFDPKMANLRKACNIYSVGVIYLVTTNTLNIL
CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEEECCEEEE
NCESFEILEKRALDTSGVTKTSTPFFSRVEGIDAGTLGKLFSGSKSRNYFAYYDALVKKE
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
KRKEVRIEKREEKVDARENKQEIKQEAIKPSHKEPKKANQNTENATQQSIKENNISPKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCC
QESKNAPTLEEKNYQKAEKKLDATEERRRLKDERKKAKAEQRAREFEQRAREHQEKDEAE
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEERRKALESNLKDERKKAKAEQRAREFEQRAREHQEKDEAELEERRKALESNKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]