| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947334
Identifier: 109947334
GI number: 109947334
Start: 669721
End: 670653
Strand: Direct
Name: 109947334
Synonym: Hac_0771
Alternate gene names: NA
Gene position: 669721-670653 (Clockwise)
Preceding gene: 109947333
Following gene: 109947336
Centisome position: 43.1
GC content: 40.51
Gene sequence:
>933_bases TTGAGGGCGGTTATTTTTTTAGCCAGTTTGGGGGTTTTGTGGGGTAGTGCTAGTGAAAAAACGCCTTTTTTTAAAACTAA AAATCATATCTATTTGGGTTTTAGGCTAGGCACAGGGGCTGATACACGCACGAGCATGTGGCAACAAGCCTATAAAGACA ACCCTACTTGCCCTAATGGCGTGTGTTATGGCGAGAAAATAGAAGCCCATTATGAAGGGGGCGAAGACTTTTCTAAGAAT TTGTCCTATCAAAAAATGTCTTATCAAAACTTGTCTTATACTGGTCAAATAGGCGATGAGATAGCCATTGATAAATACCG TATTTTAGGCTTAAGGGTGTGGGGAGATATAGAATACGCTAAGGCTCAATTAGGTCAAAAAGTGGGGGGGGATACCCTTT TATCTCAAGCGAATTATGACCCAAGCACCATTAAAACTTACGATCCTACTTCAAACACTCAAAGCCCTTTAGTCTTGCAA AAAACCCCAAGCCCCCAAGACTTCCTTTTCAATAACGGGCATTTCATGTCGTTTGGCTTGAATGTGAATGTGTTTGTTAA TCTCCCCATAGACACTCTTTTAAAACTCGCCTTAAAAACAGAAAAAATGCTGTTTTTTAAAATAGGCGTGTTTGGTGGGG GTGGGGTGGAATACGCCGTGTTGTGGAGCCCTAATTATCAAAACCAAAACACCAAGCAAGAGGATAAATTTTTTGCCGCA GGTGGGGGGTTTTTTGTGAATTTTGGGGGTTCTTTGTATATAGGCAAGCACAACCGCTTTAATGTGGGGTTAAAAATCCC TTATTATAGTTTGAGCGCTCAAAGTTGGAAAAACTTTGGCTCTAGCAATGTGTGGCAAGAGCAAACCATCCGACAAAACT TCAGCGTTTTTAGGAATAAAGAAGTTTTTGTCAGCTATGCGTTTTTGTTTTAA
Upstream 100 bases:
>100_bases CAGAAATAAAGAGCATGCGAGAGAGCATAGAGGAATTTTTTAATCAAGAAATGTTGCAAGGTGAAGTGCCATTATGGGTA GAATTGAATCAAAAAAGCGT
Downstream 100 bases:
>100_bases ATTTTACCCAATAGCACTAAAAAATCCCTAAATAAAGTGACGCTAAGCGTCCCCATAATGGCGGTTACGAAGAGATTCAC GCCCATAAAGATTTTTTGGT
Product: outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MRAVIFLASLGVLWGSASEKTPFFKTKNHIYLGFRLGTGADTRTSMWQQAYKDNPTCPNGVCYGEKIEAHYEGGEDFSKN LSYQKMSYQNLSYTGQIGDEIAIDKYRILGLRVWGDIEYAKAQLGQKVGGDTLLSQANYDPSTIKTYDPTSNTQSPLVLQ KTPSPQDFLFNNGHFMSFGLNVNVFVNLPIDTLLKLALKTEKMLFFKIGVFGGGGVEYAVLWSPNYQNQNTKQEDKFFAA GGGFFVNFGGSLYIGKHNRFNVGLKIPYYSLSAQSWKNFGSSNVWQEQTIRQNFSVFRNKEVFVSYAFLF
Sequences:
>Translated_310_residues MRAVIFLASLGVLWGSASEKTPFFKTKNHIYLGFRLGTGADTRTSMWQQAYKDNPTCPNGVCYGEKIEAHYEGGEDFSKN LSYQKMSYQNLSYTGQIGDEIAIDKYRILGLRVWGDIEYAKAQLGQKVGGDTLLSQANYDPSTIKTYDPTSNTQSPLVLQ KTPSPQDFLFNNGHFMSFGLNVNVFVNLPIDTLLKLALKTEKMLFFKIGVFGGGGVEYAVLWSPNYQNQNTKQEDKFFAA GGGFFVNFGGSLYIGKHNRFNVGLKIPYYSLSAQSWKNFGSSNVWQEQTIRQNFSVFRNKEVFVSYAFLF >Mature_310_residues MRAVIFLASLGVLWGSASEKTPFFKTKNHIYLGFRLGTGADTRTSMWQQAYKDNPTCPNGVCYGEKIEAHYEGGEDFSKN LSYQKMSYQNLSYTGQIGDEIAIDKYRILGLRVWGDIEYAKAQLGQKVGGDTLLSQANYDPSTIKTYDPTSNTQSPLVLQ KTPSPQDFLFNNGHFMSFGLNVNVFVNLPIDTLLKLALKTEKMLFFKIGVFGGGGVEYAVLWSPNYQNQNTKQEDKFFAA GGGFFVNFGGSLYIGKHNRFNVGLKIPYYSLSAQSWKNFGSSNVWQEQTIRQNFSVFRNKEVFVSYAFLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34936; Mature: 34936
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVIFLASLGVLWGSASEKTPFFKTKNHIYLGFRLGTGADTRTSMWQQAYKDNPTCPNG CCEEEEEEEHHHHCCCCCCCCCCEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCC VCYGEKIEAHYEGGEDFSKNLSYQKMSYQNLSYTGQIGDEIAIDKYRILGLRVWGDIEYA CEECCEEEEEECCCCCHHHCCCEEEEECCCCEEECCCCCEEEECEEEEEEEEEECCCHHH KAQLGQKVGGDTLLSQANYDPSTIKTYDPTSNTQSPLVLQKTPSPQDFLFNNGHFMSFGL HHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCEEECCCEEEEEEC NVNVFVNLPIDTLLKLALKTEKMLFFKIGVFGGGGVEYAVLWSPNYQNQNTKQEDKFFAA EEEEEEECCHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEE GGGFFVNFGGSLYIGKHNRFNVGLKIPYYSLSAQSWKNFGSSNVWQEQTIRQNFSVFRNK CCCEEEEECCEEEEECCCEEEEEEEECEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCC EVFVSYAFLF EEEEEEEEEC >Mature Secondary Structure MRAVIFLASLGVLWGSASEKTPFFKTKNHIYLGFRLGTGADTRTSMWQQAYKDNPTCPNG CCEEEEEEEHHHHCCCCCCCCCCEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCC VCYGEKIEAHYEGGEDFSKNLSYQKMSYQNLSYTGQIGDEIAIDKYRILGLRVWGDIEYA CEECCEEEEEECCCCCHHHCCCEEEEECCCCEEECCCCCEEEECEEEEEEEEEECCCHHH KAQLGQKVGGDTLLSQANYDPSTIKTYDPTSNTQSPLVLQKTPSPQDFLFNNGHFMSFGL HHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCEEECCCEEEEEEC NVNVFVNLPIDTLLKLALKTEKMLFFKIGVFGGGGVEYAVLWSPNYQNQNTKQEDKFFAA EEEEEEECCHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEE GGGFFVNFGGSLYIGKHNRFNVGLKIPYYSLSAQSWKNFGSSNVWQEQTIRQNFSVFRNK CCCEEEEECCEEEEECCCEEEEEEEECEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCC EVFVSYAFLF EEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA