| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947336
Identifier: 109947336
GI number: 109947336
Start: 671680
End: 672102
Strand: Direct
Name: 109947336
Synonym: Hac_0773
Alternate gene names: NA
Gene position: 671680-672102 (Clockwise)
Preceding gene: 109947334
Following gene: 109947337
Centisome position: 43.22
GC content: 43.97
Gene sequence:
>423_bases ATGAGAAAGAGTTTGGCTTTTTGCCTAATGGTTGCACTTGGCTTGCAAATTCTAGGGGCTAGAGACTTTTCGTCACTCAA AAACGAGGAGCTTTTGAAGTTGGCAGGCACTCTGCCTTCTAGTGAGGCGATTGATTATCGCATGGAAGTGTCCAAACGCC TTAAAGCTTTAAATGCTGAAGAAGCCAAGAAATTCCGCGCGAATTTCAGCCGGATCGCTAGGAAAAATCTTTCCAAAATG AGTGAAGAGGATTTCAAAAAAATGCGCGAAGAGGTGCGTAAGGAATTGGAAGAAAAAACCAAGGGCTTGAGCGCTGAAGA GATCAAGGCAAAAGGGCTTAATGTGAGCGTTTGCAGTGGCGATACGAGAAAAGTTTGGTGTAGGGCTGTTAAGAAGAAAG AAGAACATTGCTCTCCTAAGTGA
Upstream 100 bases:
>100_bases TGATATTTTCAGCAGTTTAATAATGGATTAAAATTAATGCGCTAAAATCATGGAATTTGCTGTCGTTGTGTAGCAAAAAT TTGACAATAAGGGATCGGTA
Downstream 100 bases:
>100_bases GATAACCAGTTGATTAAAAAGGATAGAACATGAAAAAAGCGTTGAAAATACTTTCTATTGGGGCGTTGTTGTTTATGAGT TTAAACGCAAAAGATTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRKSLAFCLMVALGLQILGARDFSSLKNEELLKLAGTLPSSEAIDYRMEVSKRLKALNAEEAKKFRANFSRIARKNLSKM SEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSGDTRKVWCRAVKKKEEHCSPK
Sequences:
>Translated_140_residues MRKSLAFCLMVALGLQILGARDFSSLKNEELLKLAGTLPSSEAIDYRMEVSKRLKALNAEEAKKFRANFSRIARKNLSKM SEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSGDTRKVWCRAVKKKEEHCSPK >Mature_140_residues MRKSLAFCLMVALGLQILGARDFSSLKNEELLKLAGTLPSSEAIDYRMEVSKRLKALNAEEAKKFRANFSRIARKNLSKM SEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSGDTRKVWCRAVKKKEEHCSPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15926; Mature: 15926
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSLAFCLMVALGLQILGARDFSSLKNEELLKLAGTLPSSEAIDYRMEVSKRLKALNAE CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHH EAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCC DTRKVWCRAVKKKEEHCSPK CHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRKSLAFCLMVALGLQILGARDFSSLKNEELLKLAGTLPSSEAIDYRMEVSKRLKALNAE CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHH EAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCC DTRKVWCRAVKKKEEHCSPK CHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA