| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947310
Identifier: 109947310
GI number: 109947310
Start: 650993
End: 651820
Strand: Reverse
Name: 109947310
Synonym: Hac_0741
Alternate gene names: NA
Gene position: 651820-650993 (Counterclockwise)
Preceding gene: 109947311
Following gene: 109947305
Centisome position: 41.95
GC content: 38.04
Gene sequence:
>828_bases TTGCGTGTTTTTATCATTTCTTTAAATAAAAAAGTGTGCGATACATTTGGTTTAGTTTTTAGAGACACAACAACCTTGCT CAATAATATCAATGCCACCCACCATAGAGCCGAAATTTTTGATGCGATTTATTCTAAGGCTTTTGAAGGCGGATTGCACC CCCTGGTTAAAAAGCACTTGCACCCCTATTTCATCACACAAAGCATCAAAGACATGGGGATTGCAATCAATCCTATCAGC GAGATTTCTAAGTTTTATTACGCTTTAAAATACCATGCGAAGTTTATGAATTTTGGAGAACTTGGGTGTTATGCGAGCCA TTATTCTTTATGGGAAAAATGCATAGACTTGAATGAGCCAATTTGTATTTTAGAAGATGATATAACTTTGAAAGAAAATT TTAAAGAGGGCTTGGATTTTTTAGAAAAACACATCCAAGAATTAGGCTATGTTCGTTTGATGCATTTATTATATGACCCC AATATCAAAAGTGAGCCATTAGATCATAACAACCCAGAGATACAAGAGCATATAGGGATCATTAAGGCTTATAGTGAAGG GGTGGGGACACAAGGCTATGTGATCACGCCCAAAATTGCCAAAGTTTTTTTAAAATACAGCCGGAGATGGATTGTTCCTG TGGATACGATAATGGACGCCACTTTTATCCATGGCGTCAAAAACCTGGTGTTACAATCTTTTGTGATCGCTGAAGAGGAG CAAATTTCTACGATAGAGCGGAGGGGTATAGAAGAACCCTACAGCCCCAAAATCACCTTGATGAGAGAGCTCCATTTTAA ACATTTGGAATGGTGGCGGTTTGTGTGA
Upstream 100 bases:
>100_bases TCAAGTTTTTGGCAAATAGTCTTAAAATAAGGATTTTTAAATCCTTGTTGCAACGCTATTTTAAAATGGTATGATTGATT AAAAATTATGGGAGTTTAGT
Downstream 100 bases:
>100_bases GCTCGTTTGACTATTTATGATTTTTAAAATAAATCTTTGAGACAAACAAATCCGATAAGATTTTTGAAAACAAACACCAA AACCTACAATTTAACGATTT
Product: pbeta-1,4-galactosyltransferase
Products: NA
Alternate protein names: Beta-1 4-Galactosyltransferase; Lipopolysaccharide Biosynthesis Protein; Lex2B Protein; Pbeta-1 4-Galactosyltransferase; 50S Ribosomal Protein L; LPS Glycosyltransferase Subfamily Protein; Lipooligosaccharide 5G8 Epitope Biosynthesis-Protein; Glycosyltransferase WavM; Lipooligosaccharide Biosynthesis Glycosyltransferase; Glycosyltransferase; Lob1 Protein; Glycosyl Transferase
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MRVFIISLNKKVCDTFGLVFRDTTTLLNNINATHHRAEIFDAIYSKAFEGGLHPLVKKHLHPYFITQSIKDMGIAINPIS EISKFYYALKYHAKFMNFGELGCYASHYSLWEKCIDLNEPICILEDDITLKENFKEGLDFLEKHIQELGYVRLMHLLYDP NIKSEPLDHNNPEIQEHIGIIKAYSEGVGTQGYVITPKIAKVFLKYSRRWIVPVDTIMDATFIHGVKNLVLQSFVIAEEE QISTIERRGIEEPYSPKITLMRELHFKHLEWWRFV
Sequences:
>Translated_275_residues MRVFIISLNKKVCDTFGLVFRDTTTLLNNINATHHRAEIFDAIYSKAFEGGLHPLVKKHLHPYFITQSIKDMGIAINPIS EISKFYYALKYHAKFMNFGELGCYASHYSLWEKCIDLNEPICILEDDITLKENFKEGLDFLEKHIQELGYVRLMHLLYDP NIKSEPLDHNNPEIQEHIGIIKAYSEGVGTQGYVITPKIAKVFLKYSRRWIVPVDTIMDATFIHGVKNLVLQSFVIAEEE QISTIERRGIEEPYSPKITLMRELHFKHLEWWRFV >Mature_275_residues MRVFIISLNKKVCDTFGLVFRDTTTLLNNINATHHRAEIFDAIYSKAFEGGLHPLVKKHLHPYFITQSIKDMGIAINPIS EISKFYYALKYHAKFMNFGELGCYASHYSLWEKCIDLNEPICILEDDITLKENFKEGLDFLEKHIQELGYVRLMHLLYDP NIKSEPLDHNNPEIQEHIGIIKAYSEGVGTQGYVITPKIAKVFLKYSRRWIVPVDTIMDATFIHGVKNLVLQSFVIAEEE QISTIERRGIEEPYSPKITLMRELHFKHLEWWRFV
Specific function: Unknown
COG id: COG3306
COG function: function code M; Glycosyltransferase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32106; Mature: 32106
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFIISLNKKVCDTFGLVFRDTTTLLNNINATHHRAEIFDAIYSKAFEGGLHPLVKKHL CEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHC HPYFITQSIKDMGIAINPISEISKFYYALKYHAKFMNFGELGCYASHYSLWEKCIDLNEP CHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC ICILEDDITLKENFKEGLDFLEKHIQELGYVRLMHLLYDPNIKSEPLDHNNPEIQEHIGI EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH IKAYSEGVGTQGYVITPKIAKVFLKYSRRWIVPVDTIMDATFIHGVKNLVLQSFVIAEEE HHHHHCCCCCCCEEECHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHH QISTIERRGIEEPYSPKITLMRELHFKHLEWWRFV HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVFIISLNKKVCDTFGLVFRDTTTLLNNINATHHRAEIFDAIYSKAFEGGLHPLVKKHL CEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHC HPYFITQSIKDMGIAINPISEISKFYYALKYHAKFMNFGELGCYASHYSLWEKCIDLNEP CHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC ICILEDDITLKENFKEGLDFLEKHIQELGYVRLMHLLYDPNIKSEPLDHNNPEIQEHIGI EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH IKAYSEGVGTQGYVITPKIAKVFLKYSRRWIVPVDTIMDATFIHGVKNLVLQSFVIAEEE HHHHHCCCCCCCEEECHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHH QISTIERRGIEEPYSPKITLMRELHFKHLEWWRFV HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA