| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947308
Identifier: 109947308
GI number: 109947308
Start: 648304
End: 648666
Strand: Direct
Name: 109947308
Synonym: Hac_0738
Alternate gene names: NA
Gene position: 648304-648666 (Clockwise)
Preceding gene: 109947307
Following gene: 109947309
Centisome position: 41.72
GC content: 33.61
Gene sequence:
>363_bases ATGGGCGTAGCGATTGTTTTATTTTTAACGCTGATTTTATTGTTTTTAGTTTTAAGGGATTTTGGTCTAATGAGTCTTAA GCAAAAAATATTAGCTTTTTTAATTGTAGGGATTATAGGGGCAAGCATAAGCGTTTATACTTACAAGCAAAACCAACAAA ACCAACAAGAAATCGCTTTGCAAAGAGCGTTTTTAAGGGGGGAAACCTTATTGTGTAAGGATATTAAAGTGGATAATAAA ACCTTTAATTTAGTGAGCGGGACTTTGAGTTTTTTGGGTAAAAAACAAACCCCCATGAAAGATGTTCTTGTGGATTTAGA TTCTTGTCAAACGCTTCAAAAAGATCCCTTAATCCAACCCTAA
Upstream 100 bases:
>100_bases AGCTGTTAGTCAATGATAAGGTAGTAGAAACGATTGAAAAAGGGTTTGTGATTGGCTTTGGAGCGGGGGATATTACCTAC CAATTAAGGGGCGAAATGTA
Downstream 100 bases:
>100_bases TGATGAATCACACTATACCAAAACCCTTAGAAGAAAGCCTAGATTTAAAAGAGTTTATCGCTCTTTTTAAAACCTTTTTT GCAAAAGAAGGGGGTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MGVAIVLFLTLILLFLVLRDFGLMSLKQKILAFLIVGIIGASISVYTYKQNQQNQQEIALQRAFLRGETLLCKDIKVDNK TFNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQP
Sequences:
>Translated_120_residues MGVAIVLFLTLILLFLVLRDFGLMSLKQKILAFLIVGIIGASISVYTYKQNQQNQQEIALQRAFLRGETLLCKDIKVDNK TFNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQP >Mature_119_residues GVAIVLFLTLILLFLVLRDFGLMSLKQKILAFLIVGIIGASISVYTYKQNQQNQQEIALQRAFLRGETLLCKDIKVDNKT FNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13444; Mature: 13313
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVAIVLFLTLILLFLVLRDFGLMSLKQKILAFLIVGIIGASISVYTYKQNQQNQQEIAL CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH QRAFLRGETLLCKDIKVDNKTFNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQP HHHHHCCCEEEEECCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GVAIVLFLTLILLFLVLRDFGLMSLKQKILAFLIVGIIGASISVYTYKQNQQNQQEIAL CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH QRAFLRGETLLCKDIKVDNKTFNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQP HHHHHCCCEEEEECCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA