Click here to switch to the map view.

The map label for this gene is 109947235

Identifier: 109947235

GI number: 109947235

Start: 578214

End: 579527

Strand: Reverse

Name: 109947235

Synonym: Hac_0658

Alternate gene names: NA

Gene position: 579527-578214 (Counterclockwise)

Preceding gene: 109947236

Following gene: 109947234

Centisome position: 37.29

GC content: 41.63

Gene sequence:

>1314_bases
ATGCTAGAAAATAGCTCTATATGGAGCAATCCTGCCTTTGTAGCCATCATTTGCATGTGTGTTCTTAGCCTTTTAAGGCT
CAATATCATGCTTTCTATGATTAGTGCAACTCTCATAGTAGGGCTTATGGGAGGGCTTGGACTCACAGAAAGCTTTAATG
TGATGATAGAGGGCATGAAAGGGAATTTAAACATTGCATTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT
AAAAGCAATCTCATTAAAGTCGCTTTGAACAAGCTCATCAATCTCATGGATTACAAACGATCCATTTTTTGCTTTTTAAT
CGCTTTTATCGCATGTTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC
ACTTGATGAACAGGCTAGAGCTCGATAGAAGAGCAGTGGCTTGTGCTTTAACTTTTGGCTTGCAAGCCCCATACTTGGTG
CTTCCTGTGGGATTTGGCTTGATCTTTCAAACCACGATTTTAGAGCAATTAAAAGCTAATGGCGTGGATACGAGTTTAGC
GCAAATCACAGGAGTGATGTGGATAGCGGGGTTAGCGATGGTTTTTGGACTATTCATCGCCGTGCTAGTGTTATATAAAA
ACCCAAGGCGCTATATAGAAAAATCTTTTAATATGGAAAATTACGCTGTGCTTCAATTAAACTACCATGATTATTTGACC
TTTATAGGGATTATCGTGGCTTTTGTGATCCAATTAGCCACCGATTCTATGCCTTTAGCCGCCTTTTTGGCTTTAGCGAT
CATCTTGCTAGGCCGTGGTATTAAGTTTAAAGAAACAGACTCTTTAATGGATGATAGCGTGAAAATGATGGCGTTTATCG
CTTTTGTGATGCTAGTGGCTAGTGGGTTTGGAGAAGTCTTGCAAAAAGTACATGCCATAGAAGCTCTAGTGAATGCAATT
GCAAATGTGATCCAAGGGAAGCTTTTAGGGGCTTTGTTAATGCTTGTTGCAGGGCTTTTTATCACTATGGGGATAGGGAC
TTCTTTTGGCACTATTCCTATTATCGCTGTGTTTTATGTCCCTTTGTGTGCGAAATTAGGATTCAGCACGGAATCTACGA
TTTTACTCATTGGCATAGCCGCAGCTTTAGGTGATGCAGGTTCACCGGCTAGCGATAGCACCATGGGACCTACTTGTGGG
CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATCGC
CTTTGGGGTTGCTGGAGCGTTACTATTAGGCTAA

Upstream 100 bases:

>100_bases
TTTAGAAAGGATTGGCATGGCAAGTGCAGTTTTTTGTGCTAAAAAAGCGCAAAAATTCTATCATTTTTGCGTGGTATTTT
CACTTTAACAAGGAGCAAAA

Downstream 100 bases:

>100_bases
TCTATCAAATTAAGAAAATTTTTTCTTTGGCCCTGCCCTCTGGGGTCAATGCCGTTTTAGATGTGTTGGTGGTCGCGCTT
TCAGTCTTTTTCGTGGGCAA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MLENSSIWSNPAFVAIICMCVLSLLRLNIMLSMISATLIVGLMGGLGLTESFNVMIEGMKGNLNIALSYILLGALAVAIA
KSNLIKVALNKLINLMDYKRSIFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV
LPVGFGLIFQTTILEQLKANGVDTSLAQITGVMWIAGLAMVFGLFIAVLVLYKNPRRYIEKSFNMENYAVLQLNYHDYLT
FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEALVNAI
ANVIQGKLLGALLMLVAGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSTESTILLIGIAAALGDAGSPASDSTMGPTCG
LNADNQHNHIYDTCVPTFLVYNLPLIAFGVAGALLLG

Sequences:

>Translated_437_residues
MLENSSIWSNPAFVAIICMCVLSLLRLNIMLSMISATLIVGLMGGLGLTESFNVMIEGMKGNLNIALSYILLGALAVAIA
KSNLIKVALNKLINLMDYKRSIFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV
LPVGFGLIFQTTILEQLKANGVDTSLAQITGVMWIAGLAMVFGLFIAVLVLYKNPRRYIEKSFNMENYAVLQLNYHDYLT
FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEALVNAI
ANVIQGKLLGALLMLVAGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSTESTILLIGIAAALGDAGSPASDSTMGPTCG
LNADNQHNHIYDTCVPTFLVYNLPLIAFGVAGALLLG
>Mature_437_residues
MLENSSIWSNPAFVAIICMCVLSLLRLNIMLSMISATLIVGLMGGLGLTESFNVMIEGMKGNLNIALSYILLGALAVAIA
KSNLIKVALNKLINLMDYKRSIFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV
LPVGFGLIFQTTILEQLKANGVDTSLAQITGVMWIAGLAMVFGLFIAVLVLYKNPRRYIEKSFNMENYAVLQLNYHDYLT
FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEALVNAI
ANVIQGKLLGALLMLVAGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSTESTILLIGIAAALGDAGSPASDSTMGPTCG
LNADNQHNHIYDTCVPTFLVYNLPLIAFGVAGALLLG

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 46952; Mature: 46952

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENSSIWSNPAFVAIICMCVLSLLRLNIMLSMISATLIVGLMGGLGLTESFNVMIEGMK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCC
GNLNIALSYILLGALAVAIAKSNLIKVALNKLINLMDYKRSIFCFLIAFIACFSQNLVPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLVLPVGFGLIFQTTILEQLKAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCC
GVDTSLAQITGVMWIAGLAMVFGLFIAVLVLYKNPRRYIEKSFNMENYAVLQLNYHDYLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECHHHHHH
FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SGFGEVLQKVHAIEALVNAIANVIQGKLLGALLMLVAGLFITMGIGTSFGTIPIIAVFYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
PLCAKLGFSTESTILLIGIAAALGDAGSPASDSTMGPTCGLNADNQHNHIYDTCVPTFLV
HHHHHCCCCCCCHHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YNLPLIAFGVAGALLLG
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLENSSIWSNPAFVAIICMCVLSLLRLNIMLSMISATLIVGLMGGLGLTESFNVMIEGMK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCC
GNLNIALSYILLGALAVAIAKSNLIKVALNKLINLMDYKRSIFCFLIAFIACFSQNLVPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLVLPVGFGLIFQTTILEQLKAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCC
GVDTSLAQITGVMWIAGLAMVFGLFIAVLVLYKNPRRYIEKSFNMENYAVLQLNYHDYLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECHHHHHH
FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SGFGEVLQKVHAIEALVNAIANVIQGKLLGALLMLVAGLFITMGIGTSFGTIPIIAVFYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
PLCAKLGFSTESTILLIGIAAALGDAGSPASDSTMGPTCGLNADNQHNHIYDTCVPTFLV
HHHHHCCCCCCCHHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YNLPLIAFGVAGALLLG
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]