| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fucP [H]
Identifier: 109947009
GI number: 109947009
Start: 347923
End: 349146
Strand: Direct
Name: fucP [H]
Synonym: Hac_0402
Alternate gene names: 109947009
Gene position: 347923-349146 (Clockwise)
Preceding gene: 109947008
Following gene: 109947015
Centisome position: 22.39
GC content: 42.32
Gene sequence:
>1224_bases ATGCAAAAGACTTCTAACACTTTGGCGCTGACGAGCTTGACGGCGTTATTCTTTTTAATGGGTTTCATCACGGTTTTAAA TGACATTTTAATTCCGCATTTAAAACCCATTTTTGACTTGACCTATTTTGAAGCCTCGCTCATCCAGTTTTGCTTTTTTG GGGCGTATTTTATCATGGGGGGAGTTTTTGGGAATGTGATCAGTAAAATCGGCTACCCTTTTGGCGTGGTGCTTGGCTTT GTGATCACGGCGAGTGGGTGTGCGTTGTTTTATCCGGCGGCGCATTTAGGTTCTTATAAGGTGTTTTTAGGGGCGTTGTT CATTTTAGCGAGTGGGATTGTGTGCTTGCAAACTGCCGGAAATCCTTTCGTAACCTTGCTTTCAAAGGGTAAAGAAGCCA GAAACTTGGTTTTAGTCCAGGCGTTCAACTCGCTTGGCACGACTTTAGGGCCTATTTTTGGGAGCTTGTTGATTTTTAGC ACGACTAAAATGGGCGATAATTCAAGCTTGATAGACAAATTGGCGGACGCTAAAAGCGTTCAAATGCCTTACTTGGGCTT GGCGGCGTTTTCGCTCCTTTTAGCGCTCATCATGTATCTTTTAAAATTGCCTAATGTGGAAAAAGAAATGCCTAAAGAGA CGACGCAAAAAAGCCTGTTCTCGCACAAACACTTTGTTTTTGGAGCTTTAGGGATCTTTTTTTATGTGGGAGGAGAGGTT ACGATTGGCTCATTCTTGGTGTTGAGCTTTGAAAAGCTTTTAAATTTAGACGCTCAAACAAGTGCGCATTACTTGGTGTA TTATTGGGGAGGTGCGATGGTAGGGCGCTTTTTAGGTAGTGTGCTGATGAATAAAATCGCTCCTAATAAATACCTAGCTT TCAACGCCTTAAGCTCTATTGTTCTTATCGCTTTAGCCATTCTCATTGGAGGTAAGATCGCTCTATTTGCTTTGACTTTT GTGGGTTTTTTTAACTCTATCATGTTCCCTACCATCTTTTCTTTGGCCACGCTCAATTTAGGGCATCTCACTTCTAAGGC TTCTGGAGTGATCAGCATGGCAATTGTGGGAGGGGCGTTAATCCCCCCCATTCAAGGCGTGGTTACAGATAAGCTAGCGG CAGCTGATTTGAATTTGCTCTACGCTTATAGCGTGCCGTTGTTATGCTATTTTTATATTTTGTTCTTTGCTCTTAAAGGA TATCAACAACAAGAAAACTCCTAA
Upstream 100 bases:
>100_bases TACCCACTTCTTGGCTCTTTTTCTCATTTTAAATCGTTTATTATCCTAAAACACTCACAATAGCATTATGATTATAGTAA CTCAATCATAAGGAGAAGGT
Downstream 100 bases:
>100_bases AAAAAGGGGGTTTCTTTTTTATTTTTCTTTGCTTACTTTTGAAAGCTTAAAAAATACTAACAGCATTTTTAAAACAAAAA CAAAAGAGCTTGACGCTAGT
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MQKTSNTLALTSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMGGVFGNVISKIGYPFGVVLGF VITASGCALFYPAAHLGSYKVFLGALFILASGIVCLQTAGNPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFS TTKMGDNSSLIDKLADAKSVQMPYLGLAAFSLLLALIMYLLKLPNVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV TIGSFLVLSFEKLLNLDAQTSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSIVLIALAILIGGKIALFALTF VGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGALIPPIQGVVTDKLAAADLNLLYAYSVPLLCYFYILFFALKG YQQQENS
Sequences:
>Translated_407_residues MQKTSNTLALTSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMGGVFGNVISKIGYPFGVVLGF VITASGCALFYPAAHLGSYKVFLGALFILASGIVCLQTAGNPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFS TTKMGDNSSLIDKLADAKSVQMPYLGLAAFSLLLALIMYLLKLPNVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV TIGSFLVLSFEKLLNLDAQTSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSIVLIALAILIGGKIALFALTF VGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGALIPPIQGVVTDKLAAADLNLLYAYSVPLLCYFYILFFALKG YQQQENS >Mature_407_residues MQKTSNTLALTSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMGGVFGNVISKIGYPFGVVLGF VITASGCALFYPAAHLGSYKVFLGALFILASGIVCLQTAGNPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFS TTKMGDNSSLIDKLADAKSVQMPYLGLAAFSLLLALIMYLLKLPNVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV TIGSFLVLSFEKLLNLDAQTSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSIVLIALAILIGGKIALFALTF VGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGALIPPIQGVVTDKLAAADLNLLYAYSVPLLCYFYILFFALKG YQQQENS
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=428, Percent_Identity=36.214953271028, Blast_Score=227, Evalue=8e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43991; Mature: 43991
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTSNTLALTSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVFGNVISKIGYPFGVVLGFVITASGCALFYPAAHLGSYKVFLGALFILASGIVCLQTAG HHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCHHHHCHHHHHHHHHHHHHCCHHEEECCC NPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFSTTKMGDNSSLIDKLADAKSV CHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC QMPYLGLAAFSLLLALIMYLLKLPNVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TIGSFLVLSFEKLLNLDAQTSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSI HHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VLIALAILIGGKIALFALTFVGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHH IPPIQGVVTDKLAAADLNLLYAYSVPLLCYFYILFFALKGYQQQENS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MQKTSNTLALTSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVFGNVISKIGYPFGVVLGFVITASGCALFYPAAHLGSYKVFLGALFILASGIVCLQTAG HHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCHHHHCHHHHHHHHHHHHHCCHHEEECCC NPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFSTTKMGDNSSLIDKLADAKSV CHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC QMPYLGLAAFSLLLALIMYLLKLPNVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TIGSFLVLSFEKLLNLDAQTSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSI HHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VLIALAILIGGKIALFALTFVGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHH IPPIQGVVTDKLAAADLNLLYAYSVPLLCYFYILFFALKGYQQQENS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]