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The map label for this gene is deoD [H]

Identifier: 109947007

GI number: 109947007

Start: 345338

End: 346039

Strand: Direct

Name: deoD [H]

Synonym: Hac_0400

Alternate gene names: 109947007

Gene position: 345338-346039 (Clockwise)

Preceding gene: 109947006

Following gene: 109947008

Centisome position: 22.22

GC content: 41.45

Gene sequence:

>702_bases
ATGACCCCTCACATTAACGCCAAAATCGGCGACTTTCATCCTCAATGCATTTTATGCGGCGATCCTTTAAGGGTGAGCTA
TATTGCAAAAAATTTTTTACAAGACGCTAGAGAGATCACGAATGTGCGTAACATGCTCGGTTTTAGCGGGAAGTATAAGG
GGAAGGAAATTTCTTTAATGGGGCATGGCATGGGCATTGCGTCATGCACGATTTATGTTACAGAGTTGGTTAAAACCTAT
CAAGTTAAAGAGCTTTTAAGGATTGGCACTTGTGGGGCGATCAGCCCGAAGGTCGGCTTGAGAGACATTATCATGGTTAC
TGGAGCTTCAACGGACTCTAAAACCAATCGGATCCGTTTCTTGAACCATGATTTGAGTGCAACGCCTGATTTTGAATTGA
GCTTAAGGGCGTATCAAACGGCAAAGCGTTTGGAAATTGACTTGAAAGTGGGTAATATTTTTACGAGCGATTTTTTCTAT
TCTTTTGAAACGCATGCCTTTGATTTGTTGGCCAAATACAACCACTTGGGTATTGAAATGGAAGCGGCAGGGTTATACGC
CACGGCGATGGAATTAAGTGCTAAAGCTTTATGCTTATGCTCCGTGTCTGATCATTTGATCACTAAAGAAGCCTTAAGTC
CTAAAGAAAGGATAGAAAGTTTTAACAACATGATCATTCTAGCTTTAGAGATGATGGGCTAA

Upstream 100 bases:

>100_bases
GGAGCGAGACTTTTGCGGATATTGGGCAGAGTATCGCTCATTTTTTGGGATTAAGCCCCCTAGATTATGGCAAAAATTTA
TTGAATTTTAAAGGACAACC

Downstream 100 bases:

>100_bases
CGATCTTTTTAAACTTTATTTTTTGCCCCCATAAGTTAAGGATAAACTTTTAAGGAAAACCCTTAAAGTTAAAAGCCTTA
AGGGAGCTTTGGAAAAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTPHINAKIGDFHPQCILCGDPLRVSYIAKNFLQDAREITNVRNMLGFSGKYKGKEISLMGHGMGIASCTIYVTELVKTY
QVKELLRIGTCGAISPKVGLRDIIMVTGASTDSKTNRIRFLNHDLSATPDFELSLRAYQTAKRLEIDLKVGNIFTSDFFY
SFETHAFDLLAKYNHLGIEMEAAGLYATAMELSAKALCLCSVSDHLITKEALSPKERIESFNNMIILALEMMG

Sequences:

>Translated_233_residues
MTPHINAKIGDFHPQCILCGDPLRVSYIAKNFLQDAREITNVRNMLGFSGKYKGKEISLMGHGMGIASCTIYVTELVKTY
QVKELLRIGTCGAISPKVGLRDIIMVTGASTDSKTNRIRFLNHDLSATPDFELSLRAYQTAKRLEIDLKVGNIFTSDFFY
SFETHAFDLLAKYNHLGIEMEAAGLYATAMELSAKALCLCSVSDHLITKEALSPKERIESFNNMIILALEMMG
>Mature_232_residues
TPHINAKIGDFHPQCILCGDPLRVSYIAKNFLQDAREITNVRNMLGFSGKYKGKEISLMGHGMGIASCTIYVTELVKTYQ
VKELLRIGTCGAISPKVGLRDIIMVTGASTDSKTNRIRFLNHDLSATPDFELSLRAYQTAKRLEIDLKVGNIFTSDFFYS
FETHAFDLLAKYNHLGIEMEAAGLYATAMELSAKALCLCSVSDHLITKEALSPKERIESFNNMIILALEMMG

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=229, Percent_Identity=55.0218340611354, Blast_Score=278, Evalue=1e-76,
Organism=Escherichia coli, GI1790265, Length=190, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 25898; Mature: 25767

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPHINAKIGDFHPQCILCGDPLRVSYIAKNFLQDAREITNVRNMLGFSGKYKGKEISLM
CCCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GHGMGIASCTIYVTELVKTYQVKELLRIGTCGAISPKVGLRDIIMVTGASTDSKTNRIRF
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
LNHDLSATPDFELSLRAYQTAKRLEIDLKVGNIFTSDFFYSFETHAFDLLAKYNHLGIEM
EECCCCCCCCCEEEHHHHHHHHHEEEEEEECCEEECCCEEEHHHHHHHHHHHHHHCCEEE
EAAGLYATAMELSAKALCLCSVSDHLITKEALSPKERIESFNNMIILALEMMG
ECCCHHHHHHHHCCCEEEEEECCCHHHHHHHCCHHHHHHHHCCEEEEEEEECC
>Mature Secondary Structure 
TPHINAKIGDFHPQCILCGDPLRVSYIAKNFLQDAREITNVRNMLGFSGKYKGKEISLM
CCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GHGMGIASCTIYVTELVKTYQVKELLRIGTCGAISPKVGLRDIIMVTGASTDSKTNRIRF
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
LNHDLSATPDFELSLRAYQTAKRLEIDLKVGNIFTSDFFYSFETHAFDLLAKYNHLGIEM
EECCCCCCCCCEEEHHHHHHHHHEEEEEEECCEEECCCEEEHHHHHHHHHHHHHHCCEEE
EAAGLYATAMELSAKALCLCSVSDHLITKEALSPKERIESFNNMIILALEMMG
ECCCHHHHHHHHCCCEEEEEECCCHHHHHHHCCHHHHHHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA