Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109946898

Identifier: 109946898

GI number: 109946898

Start: 235201

End: 236301

Strand: Reverse

Name: 109946898

Synonym: Hac_0284

Alternate gene names: NA

Gene position: 236301-235201 (Counterclockwise)

Preceding gene: 109946899

Following gene: 109946897

Centisome position: 15.21

GC content: 27.07

Gene sequence:

>1101_bases
ATGCCTTATAGACTAGAAAAAGACTTCCAAGATTTAATTACTAATAACAGCAACATTCAAAAAGATATTTGTTCTATTTT
AGAAATAAACCATAAAGATTTTAAACTTTTAAGAGAAGACACTTATATCAATGGCATTACAGCAGATTTCACGCTTTTTG
AGAAAAATAAAGTCAGAGCCATTATAGAGTGTAAGGGCGGATCTATTGGAGTGAGCGAGTATGTGCGTGGTATTGGTCAA
ATTTTTCAATACGAATATTTTTTTGAAAATAATCTGAGCCTTAAAAATTATGAATTTTGCCAAAATTTTAATAGCGTATT
GATTTTTCCTGAAAGCGTTTTAAAAAACAACGATTTTAATGTGGGGCTTTTTAAATACCCTAAAAGCAAGAAAATTTTAG
AGATCAATTCACATAATTTAGCTGTTAGATACATTAATGATAGTGAATTAGAAAAATTAAGAGAAACAAAACATAAGGAT
TTTAAGGTCATTTCGCCTTATTATGTGCGCGATATTAGATTTTTTGAAGTGTATTTTTTGCTCCAAGTTTTAGCCATTTT
TAAATTTAAAAATAAATTAGTGCATCGTAAAAATATAGAAGAAACTATTTTAAAAAAGACAAATTCGCTTAATAATGGTA
ATTGGCGGAATGTTTTTATCACGCTATCCACATTAGGTTTCATTGATAGCAAAAATTATCCCACAAGCACAGGGTTAAAC
TTTGTTAATATGAGTTATAGTGAATTTCTTGTGATGATTTTTGAAAGTTATATCAAGCCTTACTATATTGAAATTTTTAA
ACTTCTAGAAAATGATACGCTTAATTTAAAAAATAATGAAATTGCAGAACGCATTAAGATGAATTTTAACAACCATGAAG
TCTTATTTTTGACTGAGTCAAATTCAAGATACATTTCATCATGGCTTAACATCGCAAAAGATGATTTTGCTTTTTTTAGT
TTTACTAAAAGATTAGCACAAAGGCGATTAATCTTTAACCCTTTTACTAGCAATAAAGAAAATTTTATTAAGCATATTGA
AAAATATTCACTATACAATAAATATAAAGAAAGATATGAGGAAATCTTAAATGGCATATAA

Upstream 100 bases:

>100_bases
CAGAGAATTTCGCTGAAGAAGTGGCTTTGCAAATGAAGTGAGTTTTTAAGTGCATTTTGCACTTAAAAACTTTCATGATT
TTTAAACAATCCAAATTAAC

Downstream 100 bases:

>100_bases
TGTTTGTGAATTTTTTGTGGGAGCTGGTGGTTCGCATTTAGGCTTTATCCAACAAGGTTTTAAAACGCTCTATGTTAATG
ATATAGACAAAGATGCCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MPYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRAIIECKGGSIGVSEYVRGIGQ
IFQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFNVGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKD
FKVISPYYVRDIRFFEVYFLLQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLN
FVNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTESNSRYISSWLNIAKDDFAFFS
FTKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYEEILNGI

Sequences:

>Translated_366_residues
MPYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRAIIECKGGSIGVSEYVRGIGQ
IFQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFNVGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKD
FKVISPYYVRDIRFFEVYFLLQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLN
FVNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTESNSRYISSWLNIAKDDFAFFS
FTKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYEEILNGI
>Mature_365_residues
PYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRAIIECKGGSIGVSEYVRGIGQI
FQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFNVGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKDF
KVISPYYVRDIRFFEVYFLLQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLNF
VNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTESNSRYISSWLNIAKDDFAFFSF
TKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYEEILNGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43680; Mature: 43548

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRA
CCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECCEEEEEEEEECCCEEE
IIECKGGSIGVSEYVRGIGQIFQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFN
EEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCEEEEEHHHHCCCCCC
VGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKDFKVISPYYVRDIRFFEVYFL
EEEEECCCCCCEEEECCCCEEEEEECHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH
LQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLN
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEEEHEEECCCCCCCCCCCC
FVNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTES
EEECCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC
NSRYISSWLNIAKDDFAFFSFTKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EILNGI
HHHCCC
>Mature Secondary Structure 
PYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRA
CCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECCEEEEEEEEECCCEEE
IIECKGGSIGVSEYVRGIGQIFQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFN
EEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCEEEEEHHHHCCCCCC
VGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKDFKVISPYYVRDIRFFEVYFL
EEEEECCCCCCEEEECCCCEEEEEECHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH
LQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLN
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEEEHEEECCCCCCCCCCCC
FVNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTES
EEECCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC
NSRYISSWLNIAKDDFAFFSFTKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EILNGI
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA