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The map label for this gene is comB2

Identifier: 109946686

GI number: 109946686

Start: 49915

End: 50865

Strand: Direct

Name: comB2

Synonym: Hac_0053

Alternate gene names: NA

Gene position: 49915-50865 (Clockwise)

Preceding gene: 109946685

Following gene: 109946687

Centisome position: 3.21

GC content: 33.54

Gene sequence:

>951_bases
ATGCAAAGATTTTTATTTATTCTTGCGTTTGTTTTTAGCGCTTTAAGGGCCGATGATTTTTTAGAAGAAACTAACGAAAA
AGCCCTCACGAATTTAAACCACCCCATGCAAGATTTAAACGCCATTCAAGGGAGTTTTTTTAATAAAAACCGCTCAAAAA
TGTCTAACACTTTGAATATTGATTACTTTCAAGGGCAAACTTATAAGATCCGCTTGCGCTATGCGATGGCAACTTTATTG
TTTTTTTCAAAACCTATTAGCGATTTTGTTTTAGGGGATAAGGTGGGCTTTGATGCAAAAATATTAGAAAGCAATGATCA
TATTTTGCTCATCAAGCCTTTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAGTGAGGGTAAGATTTTTTCTT
TCTATGTGTTTTCTACCACTTTCACTAGCTCCAAACACCCTAATTTACAGGTTTTTATAGAAGATAAGAATTATTATTCT
AACGCTTTCATCAAGCCTAAAAAAGGGAATATAGCTGAAAATACAGCCGAAAACAATAACAAACCCTTAAAAGAAACCAA
AGAAACCAAAGAAGAAGAGATCATAACTATTGGTGATAACACCAATGCGATGAAAATCGTTAAAAAAGATATTCAAAAAG
GCTATAAGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTGTGGCTATGCTCTAAAAAATCCAAACTCTCTTTAATG
CCTAAAGAAATTTTTAACGACAAACAATTCACTTATTTCAAATTTGACAAAAGATTAGCGCTCTCTAAATTCCCAGTGAT
TTATAAGGTCGTTGATGGCTATGATAACCCAGTGAATACAAGGATTGTGGGCGATTATATTATCGCTGAAGATGTTTCGG
CTAAATGGACTTTAAGGTTGGGTAAGGGCTATTTGTGTATCCGTTTTATAAAAAAGGGTAGAGATGAATAA

Upstream 100 bases:

>100_bases
CTCCGGATTTTGATTACGCTTCCATGCCTAAAAACCCTACCGGCTTTAAAGTTACTCGCTATAGCATCACCGAAATTGCA
CCTAGAAATAAGAGCGATTG

Downstream 100 bases:

>100_bases
GTGGCTCAAGGGGGCACTTATTGTTGTAGGGGGTTTTATAACGATTGTAACAACCTCTTTAATCTACCACCAAAAGCCAA
AAGCCCCCTTAAACAACCAA

Product: ComB2 protein

Products: NA

Alternate protein names: Component Of Conjugal Plasmid Transfer System; DNA Transformation Competence; ComB2 Protein; ComB9-Like Competence Protein

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MQRFLFILAFVFSALRADDFLEETNEKALTNLNHPMQDLNAIQGSFFNKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLL
FFSKPISDFVLGDKVGFDAKILESNDHILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYS
NAFIKPKKGNIAENTAENNNKPLKETKETKEEEIITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLWLCSKKSKLSLM
PKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKGYLCIRFIKKGRDE

Sequences:

>Translated_316_residues
MQRFLFILAFVFSALRADDFLEETNEKALTNLNHPMQDLNAIQGSFFNKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLL
FFSKPISDFVLGDKVGFDAKILESNDHILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYS
NAFIKPKKGNIAENTAENNNKPLKETKETKEEEIITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLWLCSKKSKLSLM
PKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKGYLCIRFIKKGRDE
>Mature_316_residues
MQRFLFILAFVFSALRADDFLEETNEKALTNLNHPMQDLNAIQGSFFNKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLL
FFSKPISDFVLGDKVGFDAKILESNDHILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYS
NAFIKPKKGNIAENTAENNNKPLKETKETKEEEIITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLWLCSKKSKLSLM
PKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKGYLCIRFIKKGRDE

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36556; Mature: 36556

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFLFILAFVFSALRADDFLEETNEKALTNLNHPMQDLNAIQGSFFNKNRSKMSNTLNI
CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCEEEE
DYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDHILLIKPLQIGVDS
EEEECCEEEEEEHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCCCEEEEEEEEECCCC
NISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYSNAFIKPKKGNIAENTAENNN
CCEEEECCCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCC
KPLKETKETKEEEIITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLWLCSKKSKLSLM
CCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
PKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRL
CHHHCCCCCEEEEEECCHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEE
GKGYLCIRFIKKGRDE
CCCEEEEEEHHCCCCC
>Mature Secondary Structure
MQRFLFILAFVFSALRADDFLEETNEKALTNLNHPMQDLNAIQGSFFNKNRSKMSNTLNI
CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCEEEE
DYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDHILLIKPLQIGVDS
EEEECCEEEEEEHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCCCEEEEEEEEECCCC
NISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYSNAFIKPKKGNIAENTAENNN
CCEEEECCCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCC
KPLKETKETKEEEIITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLWLCSKKSKLSLM
CCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
PKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRL
CHHHCCCCCEEEEEECCHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEE
GKGYLCIRFIKKGRDE
CCCEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA