Click here to switch to the map view.

The map label for this gene is mod fragment 1 [H]

Identifier: 109946647

GI number: 109946647

Start: 6937

End: 8328

Strand: Direct

Name: mod fragment 1 [H]

Synonym: Hac_0007

Alternate gene names: 109946647

Gene position: 6937-8328 (Clockwise)

Preceding gene: 109946646

Following gene: 109946648

Centisome position: 0.45

GC content: 32.18

Gene sequence:

>1392_bases
ATGCAAAATAAAGAGATTTGTGAAGAAGAAAGCGTTAATGAAAAAAATTTAGAGATTTTTAACCGCTATTTTCCCGGTTG
CTTGAACATGGAAAATGGTGGTAAACTCACGCTAGATGCAGAAAAATTAAAAGCGTTATTAGGGGATTTTAGCGGAATAA
AAGAAGAGGGCTATGGGTTGAATTTTGTGGGTAAAAAAATCGCTTTAACTCAAGCTTTTAAGAAAAACGATAAGATTTTA
CAACCCTTAAACGAATCTAATAGCAAGCACATCCTCATCAAGGGCGATAATTTAGACGCTCTCAAAATCTTAAGACAAAG
TTATAGTGAAAAAATCAAAATGATTTACATTGACCCTCCTTACAACACCAAAAACGACAATTTTATTTACAGCGATGATT
TTTCACAATCTAATGAAGAGCTTTTAAAGCAATTGGATTATTCTAAAGAAAAATTGGATTATATCAACAATCTTTTTGGG
TCAAAATGCCATAGCGGGTGGCTTAGCTTCATGTATCCTAGATTGTTACTCGCTAAAGATTTGCTCAAAAAAGACGGCGT
GATTTTCATTTCTATTGATGACAATGAAGCCGCCCAACTCAAACTTTTATGCGATGAGATTTTTGGGGAGGGGAATTTTG
TGGCTCAATTTATATGGCATTCTAAAAATAAGCCAAGTGGCAATACAACAGAAGATAAAACGATTGACACAAGAACGGAA
TATATTTTTTGTTATCAAAAATGTAATTTTAAAGCAAATAAACATGAAAATACAAAAGAAGAATTGGAAGAAAAAGGTTA
TGTTTTAAAAGATGAGTATTTTGAAACAAGAGGGCATTATAAGCTCACTCCTTTAATGCGCTCATGTTCTGCAAGTAGTT
TTCAATATATTGAAAGCTTGGATTATGAAATACAAGCACCTGATGGCACATGGTTTAAAAATCATCAAAATATTAAAAAA
GAGAAATCATACTGCTATACTTGGAGTAAAAAATTATTTGATTTTGGTAATCAAAATGGATTTATTGAATTTCAAAAAAC
AAGCGATGGTTTTTGGTGTGCATATAGAAAAATGTATGAATTATGTGCAATTGATAATAAAAACTACAAGATTATCTATC
GTAAAAGTGGGAATGCATATTCTAATTTAATTACTAATCTTTATAGTGATATAGGAGCAAATGAAGTAAGAAATATTTTT
AATGGAGAAAAAATTTTTTCATACCCCAAACCCCTAAAACTCATTAACCGATTGATTGAATTATCCACAAACGAGGGCGA
CATCATTTTAGACTTTTTTGCTGGGAGCGGGACAACCGCGCATGCCGTGTTAGAGAGTAATAAGAGCGATTATCAAAAAT
TAAGTGAGGGGGGGGGTTATTTAATGGCTTGA

Upstream 100 bases:

>100_bases
AGGATTTTTTAAAAAATGTCAGTGTTTCACAAGGAACATTGAACATTTGAAAATTAAGGTGGAATTGGGTAATTTAAATC
ATTTAAAATAAAGGACAGAG

Downstream 100 bases:

>100_bases
ATGCTGAATTTAAAGAAAGGCGATTCATTCTGGTCCAATCAGACGAAAAAATTGATCCCAAGAAAAACAAAAGTGCGCAT
GACTTTTGTTTAAACACCCT

Product: type III restriction-modification system methylation subunit fragment 1

Products: NA

Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MQNKEICEEESVNEKNLEIFNRYFPGCLNMENGGKLTLDAEKLKALLGDFSGIKEEGYGLNFVGKKIALTQAFKKNDKIL
QPLNESNSKHILIKGDNLDALKILRQSYSEKIKMIYIDPPYNTKNDNFIYSDDFSQSNEELLKQLDYSKEKLDYINNLFG
SKCHSGWLSFMYPRLLLAKDLLKKDGVIFISIDDNEAAQLKLLCDEIFGEGNFVAQFIWHSKNKPSGNTTEDKTIDTRTE
YIFCYQKCNFKANKHENTKEELEEKGYVLKDEYFETRGHYKLTPLMRSCSASSFQYIESLDYEIQAPDGTWFKNHQNIKK
EKSYCYTWSKKLFDFGNQNGFIEFQKTSDGFWCAYRKMYELCAIDNKNYKIIYRKSGNAYSNLITNLYSDIGANEVRNIF
NGEKIFSYPKPLKLINRLIELSTNEGDIILDFFAGSGTTAHAVLESNKSDYQKLSEGGGYLMA

Sequences:

>Translated_463_residues
MQNKEICEEESVNEKNLEIFNRYFPGCLNMENGGKLTLDAEKLKALLGDFSGIKEEGYGLNFVGKKIALTQAFKKNDKIL
QPLNESNSKHILIKGDNLDALKILRQSYSEKIKMIYIDPPYNTKNDNFIYSDDFSQSNEELLKQLDYSKEKLDYINNLFG
SKCHSGWLSFMYPRLLLAKDLLKKDGVIFISIDDNEAAQLKLLCDEIFGEGNFVAQFIWHSKNKPSGNTTEDKTIDTRTE
YIFCYQKCNFKANKHENTKEELEEKGYVLKDEYFETRGHYKLTPLMRSCSASSFQYIESLDYEIQAPDGTWFKNHQNIKK
EKSYCYTWSKKLFDFGNQNGFIEFQKTSDGFWCAYRKMYELCAIDNKNYKIIYRKSGNAYSNLITNLYSDIGANEVRNIF
NGEKIFSYPKPLKLINRLIELSTNEGDIILDFFAGSGTTAHAVLESNKSDYQKLSEGGGYLMA
>Mature_463_residues
MQNKEICEEESVNEKNLEIFNRYFPGCLNMENGGKLTLDAEKLKALLGDFSGIKEEGYGLNFVGKKIALTQAFKKNDKIL
QPLNESNSKHILIKGDNLDALKILRQSYSEKIKMIYIDPPYNTKNDNFIYSDDFSQSNEELLKQLDYSKEKLDYINNLFG
SKCHSGWLSFMYPRLLLAKDLLKKDGVIFISIDDNEAAQLKLLCDEIFGEGNFVAQFIWHSKNKPSGNTTEDKTIDTRTE
YIFCYQKCNFKANKHENTKEELEEKGYVLKDEYFETRGHYKLTPLMRSCSASSFQYIESLDYEIQAPDGTWFKNHQNIKK
EKSYCYTWSKKLFDFGNQNGFIEFQKTSDGFWCAYRKMYELCAIDNKNYKIIYRKSGNAYSNLITNLYSDIGANEVRNIF
NGEKIFSYPKPLKLINRLIELSTNEGDIILDFFAGSGTTAHAVLESNKSDYQKLSEGGGYLMA

Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]

COG id: COG2189

COG function: function code L; Adenine specific DNA methylase Mod

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002295
- InterPro:   IPR002941
- InterPro:   IPR002052 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 53496; Mature: 53496

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKEICEEESVNEKNLEIFNRYFPGCLNMENGGKLTLDAEKLKALLGDFSGIKEEGYGL
CCCHHCCHHHCCCHHHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC
NFVGKKIALTQAFKKNDKILQPLNESNSKHILIKGDNLDALKILRQSYSEKIKMIYIDPP
EECCHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCC
YNTKNDNFIYSDDFSQSNEELLKQLDYSKEKLDYINNLFGSKCHSGWLSFMYPRLLLAKD
CCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLKKDGVIFISIDDNEAAQLKLLCDEIFGEGNFVAQFIWHSKNKPSGNTTEDKTIDTRTE
HHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCC
YIFCYQKCNFKANKHENTKEELEEKGYVLKDEYFETRGHYKLTPLMRSCSASSFQYIESL
EEEEEEECCCCCCCCCCHHHHHHHCCCEEECHHHHCCCCEEECHHHHHCCCHHHHHHHHC
DYEIQAPDGTWFKNHQNIKKEKSYCYTWSKKLFDFGNQNGFIEFQKTSDGFWCAYRKMYE
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
LCAIDNKNYKIIYRKSGNAYSNLITNLYSDIGANEVRNIFNGEKIFSYPKPLKLINRLIE
HHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEECCCCHHHHHHHHHH
LSTNEGDIILDFFAGSGTTAHAVLESNKSDYQKLSEGGGYLMA
CCCCCCCEEEEEECCCCCEEEHEECCCHHHHHHHHCCCCEECC
>Mature Secondary Structure
MQNKEICEEESVNEKNLEIFNRYFPGCLNMENGGKLTLDAEKLKALLGDFSGIKEEGYGL
CCCHHCCHHHCCCHHHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC
NFVGKKIALTQAFKKNDKILQPLNESNSKHILIKGDNLDALKILRQSYSEKIKMIYIDPP
EECCHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCC
YNTKNDNFIYSDDFSQSNEELLKQLDYSKEKLDYINNLFGSKCHSGWLSFMYPRLLLAKD
CCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLKKDGVIFISIDDNEAAQLKLLCDEIFGEGNFVAQFIWHSKNKPSGNTTEDKTIDTRTE
HHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCC
YIFCYQKCNFKANKHENTKEELEEKGYVLKDEYFETRGHYKLTPLMRSCSASSFQYIESL
EEEEEEECCCCCCCCCCHHHHHHHCCCEEECHHHHCCCCEEECHHHHHCCCHHHHHHHHC
DYEIQAPDGTWFKNHQNIKKEKSYCYTWSKKLFDFGNQNGFIEFQKTSDGFWCAYRKMYE
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
LCAIDNKNYKIIYRKSGNAYSNLITNLYSDIGANEVRNIFNGEKIFSYPKPLKLINRLIE
HHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEECCCCHHHHHHHHHH
LSTNEGDIILDFFAGSGTTAHAVLESNKSDYQKLSEGGGYLMA
CCCCCCCEEEEEECCCCCEEEHEECCCHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387444; 11677609 [H]