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The map label for this gene is mod fragment 2

Identifier: 109946648

GI number: 109946648

Start: 8325

End: 8915

Strand: Direct

Name: mod fragment 2

Synonym: Hac_0008

Alternate gene names: NA

Gene position: 8325-8915 (Clockwise)

Preceding gene: 109946647

Following gene: 109946649

Centisome position: 0.54

GC content: 33.84

Gene sequence:

>591_bases
TTGAATGCTGAATTTAAAGAAAGGCGATTCATTCTGGTCCAATCAGACGAAAAAATTGATCCCAAGAAAAACAAAAGTGC
GCATGACTTTTGTTTAAACACCCTAAAATCTGCCTCCCCAAGCATTTTTGACATCACCGAAGAAAGGATTAAAAGAGTGG
GGGCTAAAATCAAAGAAACTTGCCCTCTTTTAGATGTGGGTTTTCAAGCGTTTGAAATCGTTGATGATGAAATGAGCGTT
ATTTATAATAAAAATCTTAGCGAAGTGGAGCAAAAGGATTTATTCGCTTATTCTAACCCCAAAAAAAGAGAAACCCAAAC
GATTTTAACGAATCTTTTATGGTGTGAGGGTTTAGAACTCACTACCCCTATAACTTGCTTGATTGAAAATGTTTTGTATC
TGGCTAAAAATACGGCTTTCATTGTGGGGGATATAGAAATGAGCGAAGTTTTAGAAAACTTGAAAGATAAAGGGGTAGAA
AAAATTAGCATGTATATGCTTAATATCAGTAACGATAATTTATATTTGGAATTGAGCAGTAATTTGAATGAATTGCATTT
AGAGATTAACGATTTAAAAAGTAGGAGATAG

Upstream 100 bases:

>100_bases
TAGACTTTTTTGCTGGGAGCGGGACAACCGCGCATGCCGTGTTAGAGAGTAATAAGAGCGATTATCAAAAATTAAGTGAG
GGGGGGGGTTATTTAATGGC

Downstream 100 bases:

>100_bases
ATGATGAAAATCAAATTCAAACGATTAAATTATCAAGAGCAATGCTTGAAGCAAATTTTAGGGGTGTTTAATGGGATTAG
ATTGAGAGAGTCACAAAAGG

Product: type III restriction-modification system methylation subunit fragment 2

Products: NA

Alternate protein names: Type III R-M System; Type III R-M System Methyltransferase; Adenine Specific DNA Methylase; Type III Restriction M Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNAEFKERRFILVQSDEKIDPKKNKSAHDFCLNTLKSASPSIFDITEERIKRVGAKIKETCPLLDVGFQAFEIVDDEMSV
IYNKNLSEVEQKDLFAYSNPKKRETQTILTNLLWCEGLELTTPITCLIENVLYLAKNTAFIVGDIEMSEVLENLKDKGVE
KISMYMLNISNDNLYLELSSNLNELHLEINDLKSRR

Sequences:

>Translated_196_residues
MNAEFKERRFILVQSDEKIDPKKNKSAHDFCLNTLKSASPSIFDITEERIKRVGAKIKETCPLLDVGFQAFEIVDDEMSV
IYNKNLSEVEQKDLFAYSNPKKRETQTILTNLLWCEGLELTTPITCLIENVLYLAKNTAFIVGDIEMSEVLENLKDKGVE
KISMYMLNISNDNLYLELSSNLNELHLEINDLKSRR
>Mature_196_residues
MNAEFKERRFILVQSDEKIDPKKNKSAHDFCLNTLKSASPSIFDITEERIKRVGAKIKETCPLLDVGFQAFEIVDDEMSV
IYNKNLSEVEQKDLFAYSNPKKRETQTILTNLLWCEGLELTTPITCLIENVLYLAKNTAFIVGDIEMSEVLENLKDKGVE
KISMYMLNISNDNLYLELSSNLNELHLEINDLKSRR

Specific function: Unknown

COG id: COG2189

COG function: function code L; Adenine specific DNA methylase Mod

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22572; Mature: 22572

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEFKERRFILVQSDEKIDPKKNKSAHDFCLNTLKSASPSIFDITEERIKRVGAKIKET
CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
CPLLDVGFQAFEIVDDEMSVIYNKNLSEVEQKDLFAYSNPKKRETQTILTNLLWCEGLEL
CCHHHHCCHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
TTPITCLIENVLYLAKNTAFIVGDIEMSEVLENLKDKGVEKISMYMLNISNDNLYLELSS
CCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCHHEEEEEEEEECCCCEEEEECC
NLNELHLEINDLKSRR
CCCEEEEEEHHHCCCC
>Mature Secondary Structure
MNAEFKERRFILVQSDEKIDPKKNKSAHDFCLNTLKSASPSIFDITEERIKRVGAKIKET
CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
CPLLDVGFQAFEIVDDEMSVIYNKNLSEVEQKDLFAYSNPKKRETQTILTNLLWCEGLEL
CCHHHHCCHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
TTPITCLIENVLYLAKNTAFIVGDIEMSEVLENLKDKGVEKISMYMLNISNDNLYLELSS
CCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCHHEEEEEEEEECCCCEEEEECC
NLNELHLEINDLKSRR
CCCEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA