| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
Click here to switch to the map view.
The map label for this gene is 108812971
Identifier: 108812971
GI number: 108812971
Start: 3166832
End: 3167026
Strand: Reverse
Name: 108812971
Synonym: YPN_2811
Alternate gene names: NA
Gene position: 3167026-3166832 (Counterclockwise)
Preceding gene: 108812972
Following gene: 108812970
Centisome position: 69.84
GC content: 52.31
Gene sequence:
>195_bases ATGAACTTGTTACAGCCAATGGCGGTTCAGGAGGCAACGGTGGCAATGGAGGTGGGGGGCGTAATTCCAATGGTGGCGCA GGAGGCCGTGGTGGTGATGGGGGAAATTCTGGAAGTGGAAGCGGCAGTGGTAATGGTAGTGGAAGTAATAATGGGACAGG TAACGGAAGTGGCCAAGCCTAATATTGTAAGATGA
Upstream 100 bases:
>100_bases TTATCTTTAATATTATTTCCCACGATATCAATCGCCTCACCACAAATTAATCAAGAGAATAAAATTAAATCGGACATAAA ATCGAATTCAGTATATTCAT
Downstream 100 bases:
>100_bases GTAAAATATCGATGCAATTAATATGGAGGCACTATGAATGCAATTATCAGTTCGAAAAAATTATTATTGTTAAGTTTATC CTGTTTATTACCCTTACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MNLLQPMAVQEATVAMEVGGVIPMVAQEAVVVMGEILEVEAAVVMVVEVIMGQVTEVAKPNIVR
Sequences:
>Translated_64_residues MNLLQPMAVQEATVAMEVGGVIPMVAQEAVVVMGEILEVEAAVVMVVEVIMGQVTEVAKPNIVR >Mature_64_residues MNLLQPMAVQEATVAMEVGGVIPMVAQEAVVVMGEILEVEAAVVMVVEVIMGQVTEVAKPNIVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6762; Mature: 6762
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 10.9 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 10.9 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLQPMAVQEATVAMEVGGVIPMVAQEAVVVMGEILEVEAAVVMVVEVIMGQVTEVAKP CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NIVR CCCC >Mature Secondary Structure MNLLQPMAVQEATVAMEVGGVIPMVAQEAVVVMGEILEVEAAVVMVVEVIMGQVTEVAKP CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NIVR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA