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The map label for this gene is 108812972

Identifier: 108812972

GI number: 108812972

Start: 3167555

End: 3167788

Strand: Reverse

Name: 108812972

Synonym: YPN_2812

Alternate gene names: NA

Gene position: 3167788-3167555 (Counterclockwise)

Preceding gene: 108812973

Following gene: 108812971

Centisome position: 69.86

GC content: 40.6

Gene sequence:

>234_bases
ATGTTGGAAAAGCTGAGGCCAACCTGTCGGCGAGCTGAAATTATCACATTAATCCTGGAGGATTATGTCATACACAAAAG
CCGTAAAGTAGAAGACTGGTTACAGGAAAACCCGAAGGTTAAGCTGTTGTTTTTACCGACATATTCACCATGGTTAAATA
AAATAGGGTTGCTTTGGTTATCACTGTACGAAACCATCACTCGTAACCATCAATGTCGTTACATGTGGCAATGA

Upstream 100 bases:

>100_bases
GGCAGAATCAAAAACACTATCTTGCAGGAACAGTCAATACGATGACAGGTAGGAGCGATTACGTTAGGGAGCAAGCAAAA
ACGCTATCTTATTTATCAAT

Downstream 100 bases:

>100_bases
CTGATAAAAGTGAAGCAATTTATGGCGGTGGCTTCACCTTTCCCCGGAAACCAGCCCGGAGAAGCAAAGGTGTAGCGGTA
GTATGAAAAGCTATTTATTA

Product: transposase

Products: NA

Alternate protein names: ISO-IS200 39 kDa protein [H]

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MLEKLRPTCRRAEIITLILEDYVIHKSRKVEDWLQENPKVKLLFLPTYSPWLNKIGLLWLSLYETITRNHQCRYMWQ

Sequences:

>Translated_77_residues
MLEKLRPTCRRAEIITLILEDYVIHKSRKVEDWLQENPKVKLLFLPTYSPWLNKIGLLWLSLYETITRNHQCRYMWQ
>Mature_77_residues
MLEKLRPTCRRAEIITLILEDYVIHKSRKVEDWLQENPKVKLLFLPTYSPWLNKIGLLWLSLYETITRNHQCRYMWQ

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 9474; Mature: 9474

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKLRPTCRRAEIITLILEDYVIHKSRKVEDWLQENPKVKLLFLPTYSPWLNKIGLLWL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
SLYETITRNHQCRYMWQ
HHHHHHHCCCCEEEECC
>Mature Secondary Structure
MLEKLRPTCRRAEIITLILEDYVIHKSRKVEDWLQENPKVKLLFLPTYSPWLNKIGLLWL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
SLYETITRNHQCRYMWQ
HHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]