Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812969

Identifier: 108812969

GI number: 108812969

Start: 3165697

End: 3166011

Strand: Reverse

Name: 108812969

Synonym: YPN_2809

Alternate gene names: NA

Gene position: 3166011-3165697 (Counterclockwise)

Preceding gene: 108812970

Following gene: 108812968

Centisome position: 69.82

GC content: 53.97

Gene sequence:

>315_bases
ATGCAGCAAATGGTAATGGGGGTAATGGGGGTGATGGATCTAATAGTGGTAATGGTGGAAACGGAGGAAATGCAGGAACC
GACAGTAATGGAAACGGCGGGCATGGTGGTTCGGGAGGTAATAACGGGGGAAATGGGGGACGAGGGGGAAATGGAGATGG
TTCTGGAAATGGTGGTCGCGGTGGTGATGCTGGATGGGGAGGGGGAAGTGGAGGATCAGGTGGTCGAGGTGGCGCTAGCG
GCCAAGATGGTTCTTCCGGTACGAGTACGGCCAGATAAACGCCGTCTCATTCCAGCAAACTATCCATTCCATTAA

Upstream 100 bases:

>100_bases
AATATGAGAATAGTTAATTACGCCTTAATGTCGTCTCTATTTTCCATGTGTTCTTTACCACTCATAACAACTATTTTATC
TACAGTGCCTACAGCTGTAT

Downstream 100 bases:

>100_bases
TCGGCATTGTGTTTGAAGCCGCCAACAGAGCGGTTAATGAGATGGTCACTCCCACCTTGTGAGCGGTAAGCTGACAGGGT
GTTTTCTTTGGAAGGGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVAVVMLDGEGEVEDQVVEVALA
AKMVLPVRVRPDKRRLIPANYPFH

Sequences:

>Translated_104_residues
MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVAVVMLDGEGEVEDQVVEVALA
AKMVLPVRVRPDKRRLIPANYPFH
>Mature_104_residues
MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVAVVMLDGEGEVEDQVVEVALA
AKMVLPVRVRPDKRRLIPANYPFH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11582; Mature: 11582

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
14.4 %Met     (Translated Protein)
14.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
14.4 %Met     (Mature Protein)
14.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVA
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVMLDGEGEVEDQVVEVALAAKMVLPVRVRPDKRRLIPANYPFH
HHHCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVA
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVMLDGEGEVEDQVVEVALAAKMVLPVRVRPDKRRLIPANYPFH
HHHCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA