| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812886
Identifier: 108812886
GI number: 108812886
Start: 3074754
End: 3075014
Strand: Reverse
Name: 108812886
Synonym: YPN_2726
Alternate gene names: NA
Gene position: 3075014-3074754 (Counterclockwise)
Preceding gene: 108812887
Following gene: 108812885
Centisome position: 67.81
GC content: 57.09
Gene sequence:
>261_bases ATGAGCCGCTATTCCGTAAGTGAATATACCGGAGCGTTACAAGCGCTGATGCCGATGGGATTAGTGTGGCCCCGACGGCA CGATGGCATACAGACCGAGGTACTGCGGGCGTTGGCGAATGCTTACCAACGCAGCGATGAAGATGCACAAGATCTGCTGT CGGCGGCTTTCCCGGCCACCGCCACGGCTCTCTTACCTGAATGGGAAGCGACACTGGGCTTGCCCGATTTGTGTGCGCGA TTGGTGAGATCGATAGCATGA
Upstream 100 bases:
>100_bases GCGAAGTACCTGGAAGCGGGGGGTTTATTATGGCATCCCCGTCGGCCAATATTGAACTGCAAACTGGCAAACTCCCCGTT CGGGGTACAGTGAGTTACCT
Downstream 100 bases:
>100_bases TCCAACGCCAGCGGGCGGTGGTCGCCAAATTGTTTGGTATTGGCGGCCAATCGGCGGCGTACTTTATCCGCGTGGCAAAG GCTCTGGGCTATGACATTAC
Product: bacteriophage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCAR LVRSIA
Sequences:
>Translated_86_residues MSRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCAR LVRSIA >Mature_85_residues SRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCARL VRSIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9433; Mature: 9302
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPAT CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ATALLPEWEATLGLPDLCARLVRSIA HHHHCCCHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPAT CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ATALLPEWEATLGLPDLCARLVRSIA HHHHCCCHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA