| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108811906
Identifier: 108811906
GI number: 108811906
Start: 1965431
End: 1965901
Strand: Reverse
Name: 108811906
Synonym: YPN_1744
Alternate gene names: NA
Gene position: 1965901-1965431 (Counterclockwise)
Preceding gene: 108811907
Following gene: 108811905
Centisome position: 43.35
GC content: 45.65
Gene sequence:
>471_bases ATGCGCATACATCAGGAAAATACCGCTAAAAAGCTATATCGAAGAGTTAACACCACCACACGTCACCGCTCAAACAACCC AGGCGCAGAATATCGTTGGGAACGGTATAAACAGAAAGCAACAGATGAGAACATGCCACAGCGTGCATCAATGCATGGTA AGCAGAAACGAGGCTTGGATTACTCCCCGCTGTTTATGTTTCTGCTGACTAAAGTGGGCCAGCAATGGGATGAGGTATAC AGTCATGCGGTGAAACGCCTTGATAAACCTGAGCCGATTTTTTGGATGGTCGCATTGCACTCACATGAACAGCGCGACTA TGTCCGTTGTGGCGATACCTGTTTTTATCATGGCTTATATGTTGATGACGCAGGTATATTGCAAAAGGTGAATCCATCAC TGAGTGCAGAAGATATTCCGATGACATGCCAGTGCTGTACACATACATTCAATGGTGTTGTGGTGACATGA
Upstream 100 bases:
>100_bases GGTGTCATTTAATCATTATTGAGACTGAGGAGGCGGGTTATCACCAGCGCCAAAGGTTTTATTTTATGTCTAATCAGCTA AAAGTAATGGATTACCATTG
Downstream 100 bases:
>100_bases GTTGCTATCGATGTTCGGTGGTTATAAAACAGCTAAAGAGAGTGCCTAAATGGGGAGTGACGTGTGGCCACAATGAAAGA TGTTGCGCTGAGGGCTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLDYSPLFMFLLTKVGQQWDEVY SHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLYVDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT
Sequences:
>Translated_156_residues MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLDYSPLFMFLLTKVGQQWDEVY SHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLYVDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT >Mature_156_residues MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLDYSPLFMFLLTKVGQQWDEVY SHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLYVDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18296; Mature: 18296
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLD CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCC YSPLFMFLLTKVGQQWDEVYSHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLY CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCHHEECCEE VDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT ECCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEC >Mature Secondary Structure MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLD CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCC YSPLFMFLLTKVGQQWDEVYSHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLY CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCHHEECCEE VDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT ECCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA