| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801426
Identifier: 108801426
GI number: 108801426
Start: 4745222
End: 4746238
Strand: Reverse
Name: 108801426
Synonym: Mmcs_4463
Alternate gene names: NA
Gene position: 4746238-4745222 (Counterclockwise)
Preceding gene: 108801429
Following gene: 108801425
Centisome position: 83.19
GC content: 65.0
Gene sequence:
>1017_bases ATGGCTCGCACACGCACGGTCCGCCGGTGGCGCCGCAACATGGACGTCACCGAAGACAAGGCTTACGTCGACACATTGAC CACGCTGTCCGAGGGATCGGTGCGACGGAACTTCAACCCGTACACCGACATCGACTGGAACAGCCCCGAATTCGCCGTCG TCGACGACGACGAGCGGTGGATTCTCACCAGCACCGACCCGCTCGGGCGCCACCCGTGGTACCAGGCCCAGCCCGTCGAA CGGCAGATCGAGATCGGCCGGTGGCGGCAGGCCAACGTGGCGAAGGTCGGCCTGCAGTTCGAGATCATCCTGATCCGCGG GCTGACGAACTACGCGTTCTGGGTGCCCAACGGTTCACCCGAATACCGCTACTGCATGCACGAGACGGTCGAAGAGTGCA ACCACACCATGATGTTCCAGGAGATGGTGAACCGCATCGGCGCCGACGTGCCCGGTATGCCGCGGTTGCTGCGCTGGCTG TCGCCGTTCATCCCACTGGTGGCCGGCCCGCTGCCGATCCCGTTCTTCTTCGGCGTGCTGGCCGGCGAGGAGCCGATCGA CCACACGCAGAAGAACGTGCTCCGCGAGGGTAAGGCGCTGCACCCGATCATGGAGCGGGTCATGGCGATTCACGTCGCCG AGGAAGCCCGTCACATCTCCTTCGCACACGAATACCTGCGCAAGCGGCTGCCGCATCTTCCGCGCCGGCAGCGGTTCTTC CTGTCGCTCTACGTCCCGGTGGTGATGAGGGTGCTGTGCCAGGCGATCATCGTTCCGCCGAAGTCGTTCTGGCGTGAATT CGACATCCCGAAGTCGGTCAAGAAGGAGCTGTTCTTCCGCGCGCCGGAGTCCAGGCAGTTCCTGCGTGACATGTTCGGCG ACGTCCGGATGCTGTGCCAAGACACCGGCCTGATGAACCCGCTGGCGAAGCTGATGTGGCGCATCTGCCGGATCGACGGG CGGCCCAGCCGCTACCGCAGCGAACCGCACCGCCAACACGTCGCCACCGCGGCCTAG
Upstream 100 bases:
>100_bases AACCACAGCAAACCCTCAGAGTGGCCATGGACATTTACCCGATACCTGCGGTACTGTGTACAGAAGACCGGTGAATGTAA ACCCCACACGGGAGGCTCTC
Downstream 100 bases:
>100_bases GGGGACGCACGACCGTGCCCCATGTGATCACCCAGTCGTGCTGCAGTGACGGGTCGTGTGTCTTCGCCTGCCCGGTGAAC TGCATCCACCCCACACCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MARTRTVRRWRRNMDVTEDKAYVDTLTTLSEGSVRRNFNPYTDIDWNSPEFAVVDDDERWILTSTDPLGRHPWYQAQPVE RQIEIGRWRQANVAKVGLQFEIILIRGLTNYAFWVPNGSPEYRYCMHETVEECNHTMMFQEMVNRIGADVPGMPRLLRWL SPFIPLVAGPLPIPFFFGVLAGEEPIDHTQKNVLREGKALHPIMERVMAIHVAEEARHISFAHEYLRKRLPHLPRRQRFF LSLYVPVVMRVLCQAIIVPPKSFWREFDIPKSVKKELFFRAPESRQFLRDMFGDVRMLCQDTGLMNPLAKLMWRICRIDG RPSRYRSEPHRQHVATAA
Sequences:
>Translated_338_residues MARTRTVRRWRRNMDVTEDKAYVDTLTTLSEGSVRRNFNPYTDIDWNSPEFAVVDDDERWILTSTDPLGRHPWYQAQPVE RQIEIGRWRQANVAKVGLQFEIILIRGLTNYAFWVPNGSPEYRYCMHETVEECNHTMMFQEMVNRIGADVPGMPRLLRWL SPFIPLVAGPLPIPFFFGVLAGEEPIDHTQKNVLREGKALHPIMERVMAIHVAEEARHISFAHEYLRKRLPHLPRRQRFF LSLYVPVVMRVLCQAIIVPPKSFWREFDIPKSVKKELFFRAPESRQFLRDMFGDVRMLCQDTGLMNPLAKLMWRICRIDG RPSRYRSEPHRQHVATAA >Mature_337_residues ARTRTVRRWRRNMDVTEDKAYVDTLTTLSEGSVRRNFNPYTDIDWNSPEFAVVDDDERWILTSTDPLGRHPWYQAQPVER QIEIGRWRQANVAKVGLQFEIILIRGLTNYAFWVPNGSPEYRYCMHETVEECNHTMMFQEMVNRIGADVPGMPRLLRWLS PFIPLVAGPLPIPFFFGVLAGEEPIDHTQKNVLREGKALHPIMERVMAIHVAEEARHISFAHEYLRKRLPHLPRRQRFFL SLYVPVVMRVLCQAIIVPPKSFWREFDIPKSVKKELFFRAPESRQFLRDMFGDVRMLCQDTGLMNPLAKLMWRICRIDGR PSRYRSEPHRQHVATAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39799; Mature: 39668
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTRTVRRWRRNMDVTEDKAYVDTLTTLSEGSVRRNFNPYTDIDWNSPEFAVVDDDERW CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEECCCCE ILTSTDPLGRHPWYQAQPVERQIEIGRWRQANVAKVGLQFEIILIRGLTNYAFWVPNGSP EEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCEEEEEEEECCCCEEEECCCCCC EYRYCMHETVEECNHTMMFQEMVNRIGADVPGMPRLLRWLSPFIPLVAGPLPIPFFFGVL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH AGEEPIDHTQKNVLREGKALHPIMERVMAIHVAEEARHISFAHEYLRKRLPHLPRRQRFF CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LSLYVPVVMRVLCQAIIVPPKSFWREFDIPKSVKKELFFRAPESRQFLRDMFGDVRMLCQ HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DTGLMNPLAKLMWRICRIDGRPSRYRSEPHRQHVATAA HCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHCCCC >Mature Secondary Structure ARTRTVRRWRRNMDVTEDKAYVDTLTTLSEGSVRRNFNPYTDIDWNSPEFAVVDDDERW CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEECCCCE ILTSTDPLGRHPWYQAQPVERQIEIGRWRQANVAKVGLQFEIILIRGLTNYAFWVPNGSP EEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCEEEEEEEECCCCEEEECCCCCC EYRYCMHETVEECNHTMMFQEMVNRIGADVPGMPRLLRWLSPFIPLVAGPLPIPFFFGVL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH AGEEPIDHTQKNVLREGKALHPIMERVMAIHVAEEARHISFAHEYLRKRLPHLPRRQRFF CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LSLYVPVVMRVLCQAIIVPPKSFWREFDIPKSVKKELFFRAPESRQFLRDMFGDVRMLCQ HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DTGLMNPLAKLMWRICRIDGRPSRYRSEPHRQHVATAA HCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]