| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801429
Identifier: 108801429
GI number: 108801429
Start: 4748458
End: 4748703
Strand: Reverse
Name: 108801429
Synonym: Mmcs_4466
Alternate gene names: NA
Gene position: 4748703-4748458 (Counterclockwise)
Preceding gene: 108801430
Following gene: 108801426
Centisome position: 83.23
GC content: 74.39
Gene sequence:
>246_bases GTGGCCGCCGGAGTCGCGGCGGTGATCGCCACGGCCGTCATCGTGCTGAGCCTCGGGCTGCTGCGGGTGCATCCACTGCT GGCGGTCGGCCTGAACATGGTCGCCGTCGGCGGGCTGGCGCCGACGGTGTGGGGGTGGCGGAACCGGCCGGTGTGGCGGT GGTTCGCATTCGGGGCGGCCGTCGGGGTGGCCGCGGGCTGGACCGCGCTGCTTGCGATGACCCTCAGTGGGACGACGCCG AGCTAG
Upstream 100 bases:
>100_bases CGTCGCGACCGCTGCCGCGCTGGCGTTCTACGAACGGGTCCGATCCGGCTAGATTGACCCGGTGACCGACGAATCCACTC CGTGGGGAACGGGTTTGACA
Downstream 100 bases:
>100_bases CGCTGCCCACCGCTGGAGCGGACGCCGAGCAGCACGTCCTCCCACCCGGGAACCGTCGGCCGGGCCTTGCCCTTACGCGG CTTCGCCGGCTTGGGGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MAAGVAAVIATAVIVLSLGLLRVHPLLAVGLNMVAVGGLAPTVWGWRNRPVWRWFAFGAAVGVAAGWTALLAMTLSGTTP S
Sequences:
>Translated_81_residues MAAGVAAVIATAVIVLSLGLLRVHPLLAVGLNMVAVGGLAPTVWGWRNRPVWRWFAFGAAVGVAAGWTALLAMTLSGTTP S >Mature_80_residues AAGVAAVIATAVIVLSLGLLRVHPLLAVGLNMVAVGGLAPTVWGWRNRPVWRWFAFGAAVGVAAGWTALLAMTLSGTTPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8252; Mature: 8121
Theoretical pI: Translated: 12.98; Mature: 12.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGVAAVIATAVIVLSLGLLRVHPLLAVGLNMVAVGGLAPTVWGWRNRPVWRWFAFGAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH VGVAAGWTALLAMTLSGTTPS HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AAGVAAVIATAVIVLSLGLLRVHPLLAVGLNMVAVGGLAPTVWGWRNRPVWRWFAFGAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH VGVAAGWTALLAMTLSGTTPS HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]